Protein Info for Xcc-8004.4351.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Cell division protein FtsQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 278 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF08478: POTRA_1" amino acids 35 to 103 (69 residues), 66.2 bits, see alignment E=2.6e-22 PF03799: FtsQ_DivIB_C" amino acids 107 to 219 (113 residues), 80 bits, see alignment E=2.4e-26

Best Hits

Swiss-Prot: 100% identical to FTSQ_XANCP: Cell division protein FtsQ (ftsQ) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K03589, cell division protein FtsQ (inferred from 100% identity to xcc:XCC0728)

Predicted SEED Role

"Cell division protein FtsQ" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XAJ7 at UniProt or InterPro

Protein Sequence (278 amino acids)

>Xcc-8004.4351.1 Cell division protein FtsQ (Xanthomonas campestris pv. campestris strain 8004)
MNATLRILAWLIAVALVALPVVAVLNGWVGAERWPLARLRVSGDFKRVPAEELRAVVLPY
ARSGFFAVKLQDAQDAIARLPWVESAQVRKRWPDVLEVHVVEHKPFARWGTDRMLSEQGR
LFRTPPLLKDFKLPQLGGPDAKTQEVVALYNESRALFAPTGLDVERLEMDARGSWSLGLS
NGVQIVIGRDDARARLQRFARVLPQLTDPQRPIARADLRYTNGFTVERRMENGESGMDKK
PKPVPPAAPHALVLNSLRLRTPLLTIPHSPFAIPGFKT