Protein Info for Xcc-8004.3991.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: FIG004453: protein YceG like

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 352 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details TIGR00247: conserved hypothetical protein, YceG family" amino acids 17 to 346 (330 residues), 250.8 bits, see alignment E=1e-78 PF02618: YceG" amino acids 51 to 339 (289 residues), 263.6 bits, see alignment E=1.2e-82

Best Hits

KEGG orthology group: K07082, UPF0755 protein (inferred from 100% identity to xcc:XCC1022)

Predicted SEED Role

"FIG004453: protein YceG like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XAC3 at UniProt or InterPro

Protein Sequence (352 amino acids)

>Xcc-8004.3991.1 FIG004453: protein YceG like (Xanthomonas campestris pv. campestris strain 8004)
VGVAVTGKRGCLAVLGTVLLLAALLAIAAVVAWRHYVHFAETPVTASTPSVVIAPGDSLK
ATLRKLREAGVQQGSDLEWQLLARQVDAAGKLKVGEYALTPALPPRALLLRMRQGRVIQY
RFTLVEGWNFRQLRAALGTATPLQQTIAGLDDAALMARLGVAGQHPEGRFLPETYLYQRG
DSDLDVLKRAHAAMDKALAQAWEQRAPQLPLSSPEQALILASIIEKETALGTERPQIAGV
FVRRLQMGMKLQTDPTVIYGIGSSYDGNIRRRDLITDTPYNTYTRTGLTPTPIAMPGREA
LLAAVRPAPGNALYFVAVGDGSGAHTFSATLDEHNAAVARYLQRRRQPEPTP