Protein Info for Xcc-8004.3752.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Isopenicillin N epimerase (EC 5.1.1.17)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00266: Aminotran_5
  • amino acids 65 to 388 (324 residues), 72.8 bits, E=1.4e-24

Best Hits

KEGG orthology group: K04127, isopenicillin-N epimerase [EC: 5.1.1.17] (inferred from 100% identity to xca:xccb100_3093)

Predicted SEED Role

"Isopenicillin N epimerase (EC 5.1.1.17)" (EC 5.1.1.17)

MetaCyc Pathways

• deacetylcephalosporin C biosynthesis (1/3 steps found)
• superpathway of penicillin, cephalosporin and cephamycin biosynthesis (1/10 steps found)

KEGG Metabolic Maps

• Penicillin and cephalosporin biosynthesis

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.1.1.17

Sequence Analysis Tools

See A0A0H2X9T6 at UniProt or InterPro

Protein Sequence (418 amino acids)

>Xcc-8004.3752.1 Isopenicillin N epimerase (EC 5.1.1.17) (Xanthomonas campestris pv. campestris strain 8004)
MQSMWELDVSPTRFKAHFSLDPGVACLNHGMLGACPISVQQRQSTLRAQLERQPAAFVLR
ALPALLDTARNCLAEVIGADPQDLLLLPNVTTAMSAVLRSRIFAPGDQILTTDHAYLSCR
NLLEFIARSTGAEVMVAPVKVPVQHPDAIVDAVLERVTARTRLAVLDHVTSPTAIVFPIA
RLVERLAALGIDTLVDGAHAPGMLPLDVIAIGAAYYAGDCHKWLCTPRGAGFLHVRRDRQ
DGLHPPVISRGYGDATPGRPRLHLEFDWLGTADPTALLCIPAAIDFLATLLPGGLPAVFA
RNHALVTQAAARLAQALPLARLAPDAMVGSMVAFQLPDAASDAPDDAAASLQRWLYDAHR
IDVAVTPWPHRTNRTLRISAQVYNAAEDFMQLDAPLAQCLAPDDRQSNNQCRTTEVMR