Protein Info for Xcc-8004.333.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 441 PF02492: cobW" amino acids 12 to 217 (206 residues), 178.2 bits, see alignment E=1.3e-56 PF07683: CobW_C" amino acids 263 to 416 (154 residues), 66.3 bits, see alignment E=1.9e-22

Best Hits

KEGG orthology group: None (inferred from 100% identity to xca:xccb100_0279)

Predicted SEED Role

"Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X2X1 at UniProt or InterPro

Protein Sequence (441 amino acids)

>Xcc-8004.333.1 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family (Xanthomonas campestris pv. campestris strain 8004)
MPVLAPRDSRLPVTVLSGFLGAGKTTLLNRILHNREGLRVAVIVNDMSEINIDAQLLREG
GAALRRTDETLVEFSNGCICCTLRDDLLQEVKRLASERRYDYLLIESTGIAEPMPVAATF
AVRDADGFSLSDIARLDTMVTVVDGSRFLEDFGSAATLAELGQQAGPDDTRGLVQLLGDQ
VEFADVLVISKCDQIDTPRLHRLHAVLRALNRDAAIVDAAHGEVPLRQLLDTGRFDFTRA
QLAPGWMQELRGQHTPETEEYGITSFVYRARRPFHPQRFARMVQGGLPQVIRSKGFFWLA
SRMDWVGELSSVGGATQTNAAGFWFAARHRVDAHAIGEPLQTSITPLPYTDIGWQRQQTQ
CWTAPLPQLHEVGDASEYAAMQRLWHPLWGDRRQELAVIGVDMDAPRTRAALDACLLSDH
ELRQGPAQWQLLDDPFPHWQR