Protein Info for Xcc-8004.3067.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Maltodextrin glucosidase (EC 3.2.1.20)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 967 signal peptide" amino acids 1 to 37 (37 residues), see Phobius details PF13802: Gal_mutarotas_2" amino acids 58 to 213 (156 residues), 61.2 bits, see alignment E=4.3e-20 PF07691: PA14" amino acids 275 to 351 (77 residues), 38.7 bits, see alignment E=2.2e-13 PF01055: Glyco_hydro_31_2nd" amino acids 410 to 749 (340 residues), 313.7 bits, see alignment E=4.3e-97 PF21365: Glyco_hydro_31_3rd" amino acids 760 to 844 (85 residues), 100.6 bits, see alignment E=1.4e-32 PF17137: DUF5110" amino acids 860 to 928 (69 residues), 83.5 bits, see alignment 2.2e-27

Best Hits

KEGG orthology group: K01811, putative family 31 glucosidase (inferred from 100% identity to xcc:XCC1755)

Predicted SEED Role

"Maltodextrin glucosidase (EC 3.2.1.20)" in subsystem Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.2.1.20

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2XA05 at UniProt or InterPro

Protein Sequence (967 amino acids)

>Xcc-8004.3067.1 Maltodextrin glucosidase (EC 3.2.1.20) (Xanthomonas campestris pv. campestris strain 8004)
MQTTHHSAGRAPASRRRPLAQCVALSLALLANAAYAQEVRKAADGVTVMPSAKGAAAVRL
QVVDAGIIRVSADPDGDFARTPSLMRVPVQGDTAFQVAEQGDSVQLKTGKVTATVSTVDG
HVSFADANGKPVLSEVAGGRSFAPLKVEGKQYLSVRQRFQSPDDEGLYGFGQHQQGWMNQ
KGRNVELQQNNIDMAVPYLVSSRNYGLLWDNNSITRLGDPRGLQPLPKSLKLYDAKGKSG
ALTARYAINGKQVLERRESEVNYQYLSDLTKFPKKAITKDKDSRMQVTWEGEIEALTGGE
HTFSLYSSEYAKLYVDGKLVIDRWRQNWNPWNHEFKLDLEPGTRHTVKIEWDLIDPSYIA
LLHRDPLPATEAKDLSLWSEAGQMIDYYFVSADSYDQAVAGYRELTGKSVMLPKWAYGFW
QSRERYKSQDELVGAVAEYRKRKLSLDNIVLDWSYWPENAWGSHDFDPQHFPDPDGMVKA
VHDMHAQIMISIWPKFYPTTANYKELDAAGFMFKRNVEVGELDWIGKGYKNSFYDPYSEK
AQAIYWRQINEKLNSKGFDAWWMDADEPDVHSNLDIGERKARTTPTALGPSTEFFNSYPL
PHTHGVYVGDRAADDKRVFILSRKGYAGTQRNAVAVWSGDIVSRWDDMHDQISAGVNMAL
SGLPNWTFDIGGFAVEKRYENQDPAHLPEWRELNTRWFQFGAFVPIFRSHGQFPYREIWN
IAPEGTPFYESMAYYNRLRYALLPYIYSLAGDTYQRDGVIMRGMMMDFPDDAKARDINDQ
YLFGPAFLVAPVTRFGATSRQVYLPAGSSWLDFATGKRYEGGQTIEAAAPIERMPLFVRA
GSIVPTGPVQEYVDQKPDAPLTVVVYTGANGQFSLYEDDGKGYGYEKGEFSRIPLSWDQA
KGELRIGQREGSWTGMQAKRTINVRFVDGPREDAGALEPKVDTSIQYDGKPVSVLQRKIA
PGKARRR