Protein Info for Xcc-8004.2858.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 260 PF06564: CBP_BcsQ" amino acids 1 to 152 (152 residues), 40.4 bits, see alignment E=9.1e-14 PF13614: AAA_31" amino acids 1 to 176 (176 residues), 135 bits, see alignment E=9.7e-43 PF10609: ParA" amino acids 3 to 168 (166 residues), 32.3 bits, see alignment E=2.5e-11 PF09140: MipZ" amino acids 5 to 149 (145 residues), 28.8 bits, see alignment E=2.7e-10 PF01656: CbiA" amino acids 5 to 222 (218 residues), 71.8 bits, see alignment E=1.8e-23 PF02374: ArsA_ATPase" amino acids 9 to 129 (121 residues), 35.2 bits, see alignment E=2.9e-12

Best Hits

KEGG orthology group: K03496, chromosome partitioning protein (inferred from 100% identity to xcc:XCC1889)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X7P0 at UniProt or InterPro

Protein Sequence (260 amino acids)

>Xcc-8004.2858.1 hypothetical protein (Xanthomonas campestris pv. campestris strain 8004)
MRIWAIANQKGGVGKTTTTLALGRGLAALGHRVLLIDLDPHSSLTRAFGVAVDPPPRGVL
DLFGTPPSDLASLAHESAIPGLSYVCAQAALATLERRSANQPGLGLALQNAMARHAGQHD
YILLDCPPTLGLLMINALAACDRVVVPTQAEPLALHGLASMVRTADMVQRSRRRDLPVSI
LPTLFDRRTRAGNETLKEMQTTYGPVVWEDAVPMDTRICNAAALTVPATTTDYQGRGLSA
YRRALEWVLADDAMRMEQAA