Protein Info for Xcc-8004.2595.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: FIG01211176: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 555 PF19614: DUF6119" amino acids 18 to 553 (536 residues), 439.8 bits, see alignment E=7.2e-136 TIGR04141: sporadically distributed protein, TIGR04141 family" amino acids 20 to 552 (533 residues), 398.8 bits, see alignment E=1.6e-123

Best Hits

KEGG orthology group: None (inferred from 100% identity to xcb:XC_2085)

Predicted SEED Role

"FIG01211176: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X7C7 at UniProt or InterPro

Protein Sequence (555 amino acids)

>Xcc-8004.2595.1 FIG01211176: hypothetical protein (Xanthomonas campestris pv. campestris strain 8004)
MPKTRQLGQKNAAITTTLSLRLLRPDRTVEQAIRDTSAVAEVECDSGRLFIAQAPGTPPT
WLRVVNQFTKQGDLKLENKSCAAVLFLDIQPDDKRLRTRTFALTFGSGHHALDTDAFVRN
FGLKVTLNSVARGALKNLDIATLDSTTIQKRIQASRKADLQGFGIDLQNDLLRLAGGVPT
DTSFANALAGRDALTLTSKLSATEIPEKCKTALRLFDANDYKKDYSFIDQIIPVLDKKTL
ADLDDIVFKEIKTLLDGKPSDLHITLPEIIDPEESSDFGYFGIGFNSGSKKSYGELAIED
YILELQAGRPQEISDITELKASHEIRVVIDGHGDRQRRRRVYDCFVYEVIYKKKTYVLFS
GEWYCIESKFFDAVEKDYQALLGVSFHLKTKAKNEQELISELDKNSNLLNLDKVKASPSG
AKGANLEPCDFLSRRKEFIHLKDGHGSAPISHLWNQGLVSAESFIRDDVFRKSMRDSAIK
RQKAAKKSKFELLLPDGRSKVTSTDYKVVFGIMRHPYQRSKRLGLPFFSKVSLRAVASRI
QLMGYAVEVHLIEKT