Protein Info for Xcc-8004.2406.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Manganese transport protein MntH

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 444 transmembrane" amino acids 34 to 53 (20 residues), see Phobius details amino acids 68 to 90 (23 residues), see Phobius details amino acids 115 to 138 (24 residues), see Phobius details amino acids 144 to 166 (23 residues), see Phobius details amino acids 176 to 206 (31 residues), see Phobius details amino acids 218 to 237 (20 residues), see Phobius details amino acids 258 to 287 (30 residues), see Phobius details amino acids 307 to 335 (29 residues), see Phobius details amino acids 356 to 374 (19 residues), see Phobius details amino acids 380 to 401 (22 residues), see Phobius details amino acids 413 to 435 (23 residues), see Phobius details TIGR01197: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family" amino acids 38 to 410 (373 residues), 397.4 bits, see alignment E=4.3e-123 PF01566: Nramp" amino acids 58 to 414 (357 residues), 431.4 bits, see alignment E=1.3e-133

Best Hits

Swiss-Prot: 100% identical to MNTH_XANCP: Divalent metal cation transporter MntH (mntH) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K03322, manganese transport protein (inferred from 100% identity to xcb:XC_1947)

Predicted SEED Role

"Manganese transport protein MntH" in subsystem Transport of Manganese

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X8P9 at UniProt or InterPro

Protein Sequence (444 amino acids)

>Xcc-8004.2406.1 Manganese transport protein MntH (Xanthomonas campestris pv. campestris strain 8004)
MSSEIVPIAEPIRPADGGLGAAHASVAVPKGGHWWFRLLAFLGPGYMVSVGYMDPGNWAT
DLAGGSQFGYLLLSVILLSNLMAIVLQGLSARLGIATGLDLAQACRARYPRGINLALWGL
CELAIIACDLAEVIGTAIALKLLFGIPLTLGAIITALDVVLVLLLMNRGFRALEAFVMAL
LLVIFVCFGIQIALAAPPIAAVLAGFIPRAEVVTNPHALYLAIGIIGATVMPHNLYLHSS
IVQTRAYPRTDAGRRSALRWAVTDSTVALMFALFINAAILILAAAVFHAQGRTDVQEIEQ
AHALLAPMLGVGLASTLFAVALLASGVNSTVTATLAGQIVMEGFLRLRLPPWMRRLLTRG
IAIVPVVVVTWLYGEAGTARLLVLSQVVLSMQLPFAVIPLVRFVADRGLMGALVAPAWLV
RLAWVIALVIVGLNLKLLWEFALG