Protein Info for Xcc-8004.2065.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Cyclomaltodextrin glucanotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 557 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF00128: Alpha-amylase" amino acids 83 to 403 (321 residues), 133.7 bits, see alignment E=5.8e-43

Best Hits

KEGG orthology group: K00701, cyclomaltodextrin glucanotransferase [EC: 2.4.1.19] (inferred from 100% identity to xcc:XCC2465)

Predicted SEED Role

"Cyclomaltodextrin glucanotransferase"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.19

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X6A2 at UniProt or InterPro

Protein Sequence (557 amino acids)

>Xcc-8004.2065.1 Cyclomaltodextrin glucanotransferase (Xanthomonas campestris pv. campestris strain 8004)
MRSVLMAAMLLYSGAACAAPAPGDYYGTLEPFAADAVYFVVTDRFVNGDTGNDHRDQGGA
HRSFDVPTPCDGGVGDNIGYLGGDFKGIVDHADYIRGLGFGAVWITPIVDNPDEAFTGGK
PITCESTLSDHGKTGYHGYWGVNFYRLDEHLPSPGLDFAGFTRSMHANDLKVVLDIVGNH
GSPAYSMPVAQPGFGKLYDAQGRLVADHQNLAPAQLDPAHNPLHAFYNTSGGLAELSDLN
EDNPAVLDYLAGAYLQWMEQGADAFRIDTIGWMPDRFWHAFVARIREKRPGVFMFGEAFD
YDPAKIAGHTWARNAGVSVLDFPLKQQLSAVFGHKQAGFEQLATPLYLRKGPYGNPYELM
SFYDNHDMARLDASDTGFIDAHNWLFTARGIPVIYYGSETGFMRGRAEHAGNRNYFGEER
VSNAPQSPIFGPLQRIATLRRNTPALQRGVQVDLQLRGDQAAFLRVYQHAGMTQTALVLL
NKGDAAADIAVSRLLQPGSWRDAFSGEQVQVQGRVTLQVPAHGVRVLLSDAPVTDVALRK
QLDAQMADQAARDARNK