Protein Info for Xcc-8004.1405.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Vibrioferrin amide bond forming protein PvsB @ Siderophore synthetase superfamily, group B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 PF04183: IucA_IucC" amino acids 162 to 375 (214 residues), 111.4 bits, see alignment E=5.3e-36 PF06276: FhuF" amino acids 398 to 553 (156 residues), 73.4 bits, see alignment E=3e-24

Best Hits

KEGG orthology group: None (inferred from 100% identity to xcb:XC_1106)

Predicted SEED Role

"Vibrioferrin amide bond forming protein PvsB @ Siderophore synthetase superfamily, group B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X6L1 at UniProt or InterPro

Protein Sequence (600 amino acids)

>Xcc-8004.1405.1 Vibrioferrin amide bond forming protein PvsB @ Siderophore synthetase superfamily, group B (Xanthomonas campestris pv. campestris strain 8004)
MSNATDQHYITTRIIDACLREDLRGIASRGSAAMPDAALLAHWAAPQPPTQWWRITHLPD
GIVWLPIHHGGYLQRISACSDRWLVQRGTVVQLEHGAAAWLQRLSQGLDPDTQQLHRAYA
DEAACAAAHRGLARDAYAAQAPHLAQALRAADAAERAYRCDQLASYRDHPFYPTARAKAG
LAPAELRAYAPEFAPTFALQWLAIPQAQVSCTSTPPAELWPDLARVGLPAELAQTHQLWP
VHPLVWARLEQDGFALPAGSVRAPLTYLPVRPTLSVRTLVPLQHPHLHLKLPIPMRTLGA
LNLRLIKPSTLYDGHWLEQALRRIDAHDAALRGRCVFVDESHGGHVGQTRHLAYLLRRYP
PLDTATLVPVAALCALMPDGRPMAIHLAETFSGGDLLAWWRDYTELLLAVHLRLWLRYGI
ALEANQQNSVLVYAPGQPTRLLMKDNDAARIALPQLRAQLPEIDTLGPLHDARIAVDDAQ
ALAQMFCTIVLQLDLQAVLEGLAEWQPALRAPLYAQLQAQLAQTLAQLDAERIDTAPAPR
LLAAPQLPVKYLLSAGSLLSKQHTGARDINKFYGDSAPNPFGAAFADAEDAALRRQVAQR