Protein Info for Xcc-8004.1016.1 in Xanthomonas campestris pv. campestris strain 8004

Annotation: Sucrose phosphorylase (EC 2.4.1.7)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 637 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF00128: Alpha-amylase" amino acids 97 to 340 (244 residues), 123.1 bits, see alignment E=2.9e-39 PF11941: DUF3459" amino acids 546 to 634 (89 residues), 26.6 bits, see alignment E=9.4e-10 PF22157: SupH-like_C" amino acids 580 to 635 (56 residues), 77.5 bits, see alignment 1.4e-25

Best Hits

KEGG orthology group: K05341, amylosucrase [EC: 2.4.1.4] (inferred from 100% identity to xcc:XCC3359)

Predicted SEED Role

"Sucrose phosphorylase (EC 2.4.1.7)" in subsystem Fructooligosaccharides(FOS) and Raffinose Utilization or Sucrose utilization or Sucrose utilization Shewanella (EC 2.4.1.7)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.4 or 2.4.1.7

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0H2X5U3 at UniProt or InterPro

Protein Sequence (637 amino acids)

>Xcc-8004.1016.1 Sucrose phosphorylase (EC 2.4.1.7) (Xanthomonas campestris pv. campestris strain 8004)
MIASSPIDAAALRASVAAALDPSTAVATLARFDTHAPRLLDALSTLYGDHADYVTWLPQW
LSALGVVAQARPAALRHLDDSRAPGWFGQQDMLGYSAYVDRFAGTLRGVAERVPYLQELG
VRYLHLLPFLRARAGDNDGGFAVSDYGQVEPALGSNDDLVALTARLRAANISLCADFVLN
HTADDHAWAQAARAGDTRYLDYYHHFADRNAPDQYDTTLVQVFPQTAPGNFTWVDETRQW
MWTTFYPYQWDLNWSNPAVFGEMALAMLELANLGVEAFRLDSTAYLWKRPGTNCMNQPEA
HTILVALRAVADIVAPSVVMKAEAIVPMAELPPYFGSGVQRGHECHLAYHSTLMAAGWSA
LALQRGDILQDVIAHSPPLPPNCAWLSYVRCHDDIGWNVLQHEAAGTAAQPPFSLREVAQ
FYANAVPGSYARGESFQSSGDGVHGTNGMSAALVGVQAAHEHADAAAAARAVDRLVLLYA
VSLAMPGVPLIYMGDELALPNDTAYLDDAQRRHEGRWLHRPAMAWELAAQRHDASTLAGT
VYTRLRALIRLRAGLPALAATQSLGSVALGDARLFALTRGDSFLAVHNFSDVPLPVDLTQ
TGHALWAVLDTDGTGDAPEPHTELLLPAYGVRWLQRR