Protein Info for TX73_024185 in Rhodopseudomonas palustris CGA009

Annotation: oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 328 transmembrane" amino acids 124 to 141 (18 residues), see Phobius details amino acids 153 to 175 (23 residues), see Phobius details TIGR02823: putative quinone oxidoreductase, YhdH/YhfP family" amino acids 5 to 327 (323 residues), 463 bits, see alignment E=2e-143 PF08240: ADH_N" amino acids 31 to 90 (60 residues), 28.8 bits, see alignment E=9.6e-11 PF00107: ADH_zinc_N" amino acids 161 to 283 (123 residues), 49.9 bits, see alignment E=3.2e-17

Best Hits

Swiss-Prot: 61% identical to ACUI_RHOS4: Acrylyl-CoA reductase AcuI (acuI) from Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)

KEGG orthology group: None (inferred from 100% identity to rpa:RPA4658)

MetaCyc: 52% identical to acrylyl-CoA reductase (Escherichia coli K-12 substr. MG1655)
RXN-9087 [EC: 1.3.1.84]

Predicted SEED Role

"YhdH, a putative quinone oxidoreductase"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.3.1.84

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (328 amino acids)

>TX73_024185 oxidoreductase (Rhodopseudomonas palustris CGA009)
MATFKAVRIDKADKGTSAALTQFDEAELMDGDVTVRVEWSTLNYKDGLALTGKSPVVRRF
PMIAGIDFAGTVETSTNPNWKPGDKVIANGWGMGETHLGAYAEKARVKGDWLVRLPEGMT
ARQAMAIGTAGYTAMLSVLALENHGLKPADGPVIVTGAAGGVGSVAIALLSKLGYHVIAS
TGRMAEESYLKSLGAAEIIDRNELSGPAKPLAKERWVGGVDSVGSTTLANLLAMTKYRGA
IAACGLAGGMDLPSSVAPFILRGVSLLGIDSVMCPIDLRKQAWARLATDLDAGKLSDMTQ
EVPLDQVIDAGSKLLAGQVRGRTVVKIS