Protein Info for TX73_023255 in Rhodopseudomonas palustris CGA009

Annotation: CusA/CzcA family heavy metal efflux RND transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1031 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 336 to 354 (19 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details amino acids 388 to 412 (25 residues), see Phobius details amino acids 437 to 457 (21 residues), see Phobius details amino acids 466 to 494 (29 residues), see Phobius details amino acids 527 to 546 (20 residues), see Phobius details amino acids 861 to 882 (22 residues), see Phobius details amino acids 889 to 909 (21 residues), see Phobius details amino acids 919 to 941 (23 residues), see Phobius details amino acids 962 to 980 (19 residues), see Phobius details amino acids 992 to 1015 (24 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1016 (1016 residues), 1036.6 bits, see alignment E=0 PF00873: ACR_tran" amino acids 6 to 1017 (1012 residues), 986.9 bits, see alignment E=5.4e-301

Best Hits

KEGG orthology group: K07239, heavy-metal exporter, HME family (inferred from 64% identity to gca:Galf_1163)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1031 amino acids)

>TX73_023255 CusA/CzcA family heavy metal efflux RND transporter (Rhodopseudomonas palustris CGA009)
MLTRLVEFSLSHRLLVVLATLLLIGAGVLAFRHLPIDAFPDVSPVQVKIIMKAPGMTPEE
VETRVTMPLELEMLGIPNKAILRSTTKYGLADVTIDFADGVDIYWARNQVAERLASAMKD
MPDGLTGGLAPITTPLGEMFMFTIEGGDLTMAERRTLLDWTIRPALRTLPGVADVNSLGG
FVRSFEIVPDNLAMASHGITIDMLEKAIEKNNRNGGAGRLSAGEEVLLVRVDGQVRTLDD
LRDIVLASREGGMVRVRDVAEVRIGSITRYGAVTRDGQGEAVQGLVLGLRGANARDVVEG
VRAKFKELEPTLPKGVTLNVFYDRGDLVGRAVGTVSKSLLEAVVLVIVLLILFLGDWRAA
LVVALTLPLSALATFVLMRWAGMSANLMSLGGLAVAIGMLIDAAVVVVENVVSHLAHDRH
AAQVPLLHRIYQALREVVVPVTSGIGIIVIVFLPLLTLQGLEGKLFIPVALAIVFALGSS
LLLALTVIPVLASLLLKTAGHGDTWLVRKISAGYTPVLRFALHHEKAVLAVSALALVATV
FAYAQLGKIFMPTMEEGTPIISVEKLPSIGLEESVNLDLRIQQAVMSAVPEVRSIVARVG
SDELGLDPMGLNQTDTYIILKPEAEWRRPHDKDWLLGELRKALAGFPGIGFSFTQPIEMR
VQEMIIGARGDVVAKIFGTDIPTLNRLAEQITATLKTLKGAEDVRTALNEGFEYYNVGID
RLQAGRLGLDVDALTEALRTQIEGRQAGIVVEEGRRTPVLIRGTESLRESPARLAGINLV
LADGKSVPLTNVAKLERIDGPVKIDRENGKRLALVMSNVSGRDLVGFVDEAKAAVAAKVK
LPEGYSIVWGGQFENQQRAAARLGIVVPIALALVFLLLFVTFSSLRQSLLVFINIPFALI
GGVFSLLITGEYLSVPASVGFIALLGIAVLNGLVLVSYFNMLRGQGLPPDQIVELGAQRR
LRPILLTASITGFGLVPLLYATGPGADVQRPLAVVVIGGLVTSTLLTLVILPVLYRRFGI
PPAPKTQEAQP