Protein Info for TX73_021060 in Rhodopseudomonas palustris CGA009

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 870 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 201 to 219 (19 residues), see Phobius details amino acids 231 to 252 (22 residues), see Phobius details amino acids 302 to 326 (25 residues), see Phobius details amino acids 333 to 351 (19 residues), see Phobius details amino acids 359 to 377 (19 residues), see Phobius details amino acids 388 to 405 (18 residues), see Phobius details amino acids 410 to 427 (18 residues), see Phobius details amino acids 439 to 459 (21 residues), see Phobius details amino acids 511 to 530 (20 residues), see Phobius details amino acids 551 to 570 (20 residues), see Phobius details amino acids 593 to 613 (21 residues), see Phobius details amino acids 620 to 637 (18 residues), see Phobius details amino acids 648 to 678 (31 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA4065)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (870 amino acids)

>TX73_021060 hypothetical protein (Rhodopseudomonas palustris CGA009)
MNRLFFTAAFMKCRIRCFLFTLFILAVFAYVSASSFWQAPEAEVSLRIDHLAPPMAILPQ
ANAPRIGSINSFRIAFEILARDDYYDNLLQTSDVQGFRLELRHPRELYLVFSSNEILLSN
SFSTAEWHSIEIHFDESKGLSVTLDGKFVFHRTTNDLSRHDLSFDELIAGTGFNRKRTLQ
GEIKDFFFEAEYKPITKTSQAVKVVSAVAAALSLIGLLWRRPLGAKLPDRAWGRWLAPLL
TACPVLVYQLSYFNAFYPVTEGWFSAYAHLINLGDAPYRDFELLIPPAYPYSVAFLQDLF
GSSIIALRTVGVALMCGISIALFFILQFGFNRYIAAITATYGTIYYQSGNAFINYDYTQV
VTFFMLSGAALLIGYAKTLFSPNRAPEKLRLMCFFAGTMLALAVLTKHSNATVCTATLGV
GMLLVMARAGDFSSRLKEIAAGCLGFASPLLIILITLWYQDTLPLFFAQVLSDAAAAKGG
AAGILSNAPRSFYRGLSADLIFDLFEHSGKVLLATCLVGCIVLSLERILYRRQIRFHWSD
WYPHHTSRNTLTVNLALTSATMLVMCVWVERSGLCHDCFKFVNIDTWVQGDSIPASILLT
AFGIVVSLPIFMYRPSSTSAFWLVVSTFGIGLAWGNGTSAGFSEVGAFLGVSLAVGAALS
VGRGLSLPSLISLALIVSASDYLIDKKYTRPYDWWGVSTASVRGTSCGATSGVLEGMCVP
SDTLSRIEDITSSIVSNSSPEDAVYIYPHTPIFYLLSNRRPYHGAVVSWPDFMSMRAALS
VTSDLLSSPPKVLVVAELAPGVLEAHERLFRNGAPSPQRAILAAIEALKNDDIVEKILNI
SDVNGLTISVYRLKHTIDGRHIPIESRGRD