Protein Info for TX73_020505 in Rhodopseudomonas palustris CGA009

Annotation: negative regulator of septation ring formation

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2025 transmembrane" amino acids 108 to 134 (27 residues), see Phobius details amino acids 146 to 170 (25 residues), see Phobius details PF01442: Apolipoprotein" amino acids 262 to 441 (180 residues), 36.2 bits, see alignment E=2.6e-13 amino acids 461 to 639 (179 residues), 64 bits, see alignment E=8e-22 amino acids 701 to 829 (129 residues), 36.9 bits, see alignment 1.6e-13 amino acids 792 to 921 (130 residues), 20.4 bits, see alignment 1.8e-08 amino acids 845 to 1012 (168 residues), 14.3 bits, see alignment E=1.4e-06 amino acids 983 to 1134 (152 residues), 16.6 bits, see alignment 2.8e-07 amino acids 1122 to 1284 (163 residues), 24.2 bits, see alignment E=1.3e-09 amino acids 1303 to 1420 (118 residues), 21.4 bits, see alignment 9.3e-09 amino acids 1397 to 1586 (190 residues), 40.9 bits, see alignment E=9.7e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA3958)

Predicted SEED Role

"FIG01004555: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2025 amino acids)

>TX73_020505 negative regulator of septation ring formation (Rhodopseudomonas palustris CGA009)
MANNPKKIKDPTEVALSAIQEALNIPDAPPAGDDQAAGPKESVPNSDTPEPSFSELTELA
GEPRITPPAPSFEPAAERSFASRPANDDRETIGQLLQSLQKGRTTRNVYTLATIFAGVWV
FGGIILTVSFLPALQALVGQGSGGTLALAGLAALFFAPVMLFYFLASLAWRGQELRMIAQ
SMAQVAIRFSEPEIAASDSVVTVGQAIRREVAAMGDGVERAIARASELEALVANEVSALE
RAYSDNEVRIRALLQDIAHQRDNLVGQAEQVRSAISGVQIDLRHDIALISDAIASRVDEV
AKSITSALEERGAHITSALGHAGDNMILALGERGGELLDRLEEASSETTRAVLDASERLT
TSLNFKTGHVHAEFVELADRVHDMMNERLDRITTDFEQRSSTIIDGISERTEQVQDSLKN
SGDSLLLELELRSTDLVNKIDDAGHRLADQILTSGDKASEALDVTVNTLVAKVVSQTEAT
HDTLSIQMSAFDDLVKLQGTELAEKFARDSGTLGALITRHISEFDRTVKTFGGEIVERMG
QRTQDINETLKTYVDNFDQRVATGSGEITARLDDRLHQFESLFDTRVGSLDGAIDNRLKA
LDDTVGNHLNSLERILDTRTEAVTGNIDGRIEKLALTLSTGAANAVEAIDSRIVQLNTTL
STGTSSAADIIDGRIATLTTTLSTGAANAVEVIDDRITTLTTTLSTGTVQAIEAIDSRLT
HLTHSLTDGTAQAIDAIDRRIGAVTETIDSRTANLSTTVSARFQEIHDGLENRVTAVIND
VDLRVSQFEDLLGSRIEAVAGRFESSGREASEMLMTRAEELSQGIKTNVADAERTLTHLV
VSTSDTIRSSTQSARESMLSVSNDVGAQLQVTSAEIERALTTVGTTAAATVVSSATEAQA
KLTMVSSEAVMQFRSLSDDIERTLSAAGTATVATVLAGAREAQTTLVATSTDVTTQVKSL
ASDIERTLSEVGGHAAASLLGSAREAQTTLTSTSTEVATQVKSLASEIERSLTEAGGSTA
ASVLSSAREAQNALTTTSADVANQVKSLAVDIERTLTGAGDTTSASVLASAREAHATLVS
ASSEVTGQIRSLSTDIERTLYAAGNATAEAVLSGARSAQSTLVLASEEASDKVKSLSADI
QRTLVEASSEAANQVTTLTADVERRLSASGTNTIETIVAGAREAQNTLVASSTEAANQVK
SLASDIERTLTAAGSATAGTLLASAREVQTTLVSTSTESADQVRSIAADVERTLVAAGRS
TADSILSSAREAQTSLATASGEAANHVKSLAIDVERTLTSVGAATASTILDSARQVQSTL
TTSSVDAASQIKAISAEIEQTLSALTTNTTDHIQVSASAAQATLVAMSNEVSAKIKSTSA
DVERSVFAASGSFGSTITAKSEEIVGYVQQQAERLSQIIDGKRGVLVEAIAGKTNQLTVE
IDRVTSDALTAIESRGKTFSNSILTNGTEVARSITGAGDLATNAINKSLKDLDLASRSAI
EQSRQVSITAVTEMQETSKILRTDTVALFERLREGNILLQEVLTGAHENLNSLERALVTR
VADFVTTMNEVNARSGAATQTLEDQLTGFHTKTARALEDLGALSAQFEAHGHALAEAADL
LEHSNRQASTSVSDRKEALESLVTTLDLRTADLDQRLGRFTSLLDESLAAAEERARDVAR
IVAETAGAGSASITQQFEAVRSAAEQERRLTVEAMHQVYKQGTQEADALFKQSADRFTSI
VQGIKQMAAEMQHELESTREELRRGVLEIPQEAAESTAQMRKVIVDQIEALAELNRIVAR
HGRGMDVVTPSRAATVTTREEEPVLAAASVGRAETVAARPAPRSRESSAATLPPPDLGMP
AGPRRTEAPPVAPSNADQGRDGWLSELLNRADTSAEREPPRGRAAQQAQAAMSGNPLESL
SLDIGRLMDRNLALEMWERYQRGEAKSFTKRLYTPAGQKAFDEVARKYRSERSFKQTVDR
YIAEFERLLDEVARDENAPQALRGHLSSETGLVYTLLAHAAGRLG