Protein Info for TX73_018255 in Rhodopseudomonas palustris CGA009

Annotation: cell division protein FtsZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 592 TIGR00065: cell division protein FtsZ" amino acids 14 to 329 (316 residues), 396.2 bits, see alignment E=1.5e-122 PF00091: Tubulin" amino acids 16 to 176 (161 residues), 163.4 bits, see alignment E=7.9e-52 PF12327: FtsZ_C" amino acids 225 to 320 (96 residues), 125.3 bits, see alignment E=9.7e-41 TIGR03483: cell division protein FtsZ, alphaProteobacterial C-terminal extension" amino acids 466 to 591 (126 residues), 115.6 bits, see alignment E=2.2e-37

Best Hits

KEGG orthology group: K03531, cell division protein FtsZ (inferred from 100% identity to rpa:RPA3522)

Predicted SEED Role

"Cell division protein FtsZ (EC 3.4.24.-)" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (592 amino acids)

>TX73_018255 cell division protein FtsZ (Rhodopseudomonas palustris CGA009)
MTINLNVPDIRELRPRITVFGVGGAGGNAVNNMITAGLDGVDFVVANTDAQALTMSKAQR
LIQMGTQVTQGLGAGSQPDVGSAAAQEVIDEIRDHLSGANMVFVTAGMGGGTGTGAAPVI
AKAAREMGILTVGVVTKPFHFEGARRMRTAETGITELHKVVDTLLIIPNQNLFRVANEKT
TFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVRAVMREMGKAMMGTGEATGEKRA
LTAAEAAIANPLIDDSSMKGARGLLISITGGKDLTLFEVDEAATRIREEVDQDANIIVGA
TFDESLDGIIRVSVVATGIEQAQLSRNAGTPAAAAAVSAVGNDSRLAELTAKLRADNQRI
AEAAAMRAAQAAAAPVSAVTESSPRQAANVERAALAAIAAAVGNEPMPQEAPVQSASYGD
VTVRPIPQKPSLFPDPEQSRAVSEEPLAPEAFVPPAADRAAMRPPRMPRFDELPVPAQNE
IRQARGDGEEDHPQKNRLSLLQRLANGLGRRDDEPAEAPQVARNGGPQMPPLPDRRPQRS
VSEQMGKEPVSEYAKRPAPQGLDMHGRPAPVAPAPQGDDHLDIPAFLRRQAT