Protein Info for TX73_017460 in Rhodopseudomonas palustris CGA009

Annotation: N-6 DNA methylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 PF02384: N6_Mtase" amino acids 311 to 499 (189 residues), 40.8 bits, see alignment E=1.8e-14 PF18135: Type_ISP_C" amino acids 699 to 1058 (360 residues), 250.9 bits, see alignment E=2e-78

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA3376)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1100 amino acids)

>TX73_017460 N-6 DNA methylase (Rhodopseudomonas palustris CGA009)
MAAKSVESAVAEFGAATKSKLSNPAVSGAPEDQLRAPLERLLHALAELGGLPPTALGLVG
ETALGDLKIRPDYAVTLHNALIGFIELKAPGKGADPRRFSDPHDKAQWDKLKSLPNLLYT
DGNSFSLWRDGVLIDKPVHLDGDVETAGAKLTAPATLAPLIATFLQWSPIAPKSAKALAQ
VSARLCRLLRDEVIEQLELGSAGLTELAKDWRHLLFPQADNAQFADGYAQAVTFGLLVAR
AKDISLIKGIDAAAQELRKSNTLIGTALRLLTDDDDNQQALKTSLGTLTRVLGEVNWHVI
SKDKPEAWLYFYEDFLEVYDNTLRKKTGSYYTPPEVVAAMVRLADEALRGELFGRPKGFA
SPDVTVADPAVGTGTFLLGVLRKIAETVKDDEGAGAVRGAIEAAAKRLFGFELQFGPFAV
AQLRLIAEMQALVATKTNPLPDIPELNLFITDTLGNPFVEEESLGQVYEPIAKSRREANA
VKKDKPITVVIGNPPYKEKAKGRGGWIESGSGGDLVAPMDRWKPPKEWGVGTHAKHLKNL
YVYFWRWATWKVFGSGNYAATGFPDKDQEGIVCFITVAGFLNGPGFEKMRADLRESCSDI
WVVDCSPDGHQPEVSTRIFQGVQQPVSIVLAARKLGKAASEPARVKFRALPKGRREDKFA
ALSLIALADDAWLDCPSDGRAPFMPAAVGFWSTLPKIQELFLYDGSGVMPGRTWIIAPDR
TSLASRWDRLVSEKDPAKKELLFHPHEGGDKTSSKPTSKGLYGHAFHSASVNADPTLVTP
IAYAFRSFNRQWIIPDNRVINRPNPTLWNCYSLRQLFLTALEAKSPISGPALTFTGLIPD
LDHYNGRGGRVFPLWADSNATDSNIKPVLLAFLAERFGKAVKAEDVMSYIAALMAHPAFT
ARFAADLVQPGLRLPITADAALFDEAVRLGREVIWLHCYGERFADPAAGRPKQAPRLPKA
SAPRIPAEGAVPSAPEPLPDSISYDPATKRLRIGEGFVENVTPEMWAYEVSGKKVVWEWF
SDRRRDRTKPIIADKRPPSPLDSIQPDGWLAEYTSDLLDLLNVLGRLIELEPAQADLLDR
VCASHLFSRDDLIVAGALGA