Protein Info for TX73_016700 in Rhodopseudomonas palustris CGA009

Annotation: adenylate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 371 TIGR01351: adenylate kinase" amino acids 2 to 190 (189 residues), 203.3 bits, see alignment E=1.7e-64 PF00406: ADK" amino acids 5 to 169 (165 residues), 187.8 bits, see alignment E=2e-59 PF13207: AAA_17" amino acids 6 to 146 (141 residues), 93.1 bits, see alignment E=2.9e-30

Best Hits

KEGG orthology group: K00939, adenylate kinase [EC: 2.7.4.3] (inferred from 100% identity to rpa:RPA3229)

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.4.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (371 amino acids)

>TX73_016700 adenylate kinase (Rhodopseudomonas palustris CGA009)
MRLILLGPPGAGKGTQAGRLVEQHGIVQLSTGDMLRAAVAAGTPIGLKAKDIMAAGGLVP
DEVVIGIISDRIDQDDAAQGFILDGFPRTVPQAEALDRLLKDKGFDLDAVVELKVNEGAL
LDRVETRVAEMRARGEEPRADDNAEALAKRLSAYRAQTEPLVDYYSEKRKLLTVDGMMTI
DEVTREIGRVLDAVRAADAKKGAKAKGTKASRAKRTVKTAKKAATKGKAAKSAAKAPKKA
AAKPAAKSGAKSGSAKKSSAKQTVGKKSSGKTAVSKKVAGKPAASKAGKAAVGKTAKAGL
KKAAKAVAKAGKKAAKAAVKAAKGAAKPTAGKKAAGKKATKKAAATSKAKAVAKAPARGS
KKAKKATKKRA