Protein Info for TX73_015780 in Rhodopseudomonas palustris CGA009

Annotation: CDP-alcohol phosphatidyltransferase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 181 transmembrane" amino acids 7 to 23 (17 residues), see Phobius details amino acids 29 to 48 (20 residues), see Phobius details amino acids 60 to 81 (22 residues), see Phobius details amino acids 86 to 109 (24 residues), see Phobius details amino acids 121 to 142 (22 residues), see Phobius details amino acids 149 to 168 (20 residues), see Phobius details PF01066: CDP-OH_P_transf" amino acids 1 to 156 (156 residues), 111.6 bits, see alignment E=2.4e-36

Best Hits

KEGG orthology group: K00995, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC: 2.7.8.5] (inferred from 99% identity to rpa:RPA3050)

Predicted SEED Role

"CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria (EC 2.7.8.5)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.5

Use Curated BLAST to search for 2.7.8.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (181 amino acids)

>TX73_015780 CDP-alcohol phosphatidyltransferase family protein (Rhodopseudomonas palustris CGA009)
MSIPNIITLCRILLVPVIVWAIASNEMEIAFAVFVVAGVSDAVDGFLAKRFNMSSELGAL
LDPLADKALLVSIYVSLGIWGAIPRWLVILVVSRDIMIVGAVMISWVFGKPIPMKPLMVS
KLNTVAQVSFAALVLGALAFGFEPAPYDLFLMGAVTVLTLLSVSLYLVEWMRHMSTIEPS
R