Protein Info for TX73_014995 in Rhodopseudomonas palustris CGA009

Annotation: cation-translocating P-type ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 852 transmembrane" amino acids 47 to 66 (20 residues), see Phobius details amino acids 72 to 91 (20 residues), see Phobius details amino acids 236 to 256 (21 residues), see Phobius details amino acids 276 to 296 (21 residues), see Phobius details amino acids 645 to 668 (24 residues), see Phobius details amino acids 674 to 694 (21 residues), see Phobius details amino acids 715 to 742 (28 residues), see Phobius details amino acids 754 to 774 (21 residues), see Phobius details amino acids 787 to 808 (22 residues), see Phobius details amino acids 823 to 841 (19 residues), see Phobius details PF00690: Cation_ATPase_N" amino acids 9 to 62 (54 residues), 35.9 bits, see alignment 1.1e-12 PF00122: E1-E2_ATPase" amino acids 103 to 297 (195 residues), 128.5 bits, see alignment E=5.4e-41 PF00702: Hydrolase" amino acids 318 to 601 (284 residues), 66.1 bits, see alignment E=1.4e-21 TIGR01494: HAD ATPase, P-type, family IC" amino acids 558 to 669 (112 residues), 100.6 bits, see alignment E=3.5e-33 PF00689: Cation_ATPase_C" amino acids 671 to 841 (171 residues), 109.7 bits, see alignment E=3.7e-35

Best Hits

KEGG orthology group: K01537, Ca2+-transporting ATPase [EC: 3.6.3.8] (inferred from 100% identity to rpa:RPA2893)

Predicted SEED Role

"Cation transport ATPase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.3.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (852 amino acids)

>TX73_014995 cation-translocating P-type ATPase (Rhodopseudomonas palustris CGA009)
MSAELASASDTISGLSEREAAARLASEGYNELPSPDRRTLLGIVLEVVREPMLALLLGGG
VVYMALGDLKEAIILLIFATLSVVITVVQEARTERVLETLRDLTSPRALVIRDGIRKRIA
GREVARGDVMVLSEGDRVAADAVLLQADDLLVDESLLTGESVPVRKLSRGEADATTLRRP
GGDDQPAVYSGSLVVRGGGLAEVVATGPRSEIGKIGQALGSLQTEAPRLQIQTRAVVRTF
GFIAAGFTALVVVLYGTLRDGWLDAVLAGITVGMSMLPEEFPVVLTVFMAMGAWRISQAR
VLTRRAAAIEALGSATVLCTDKTGTLTENRMSVAELRLTSGEVFRPREGGALPVGFATLL
ETGLLAAAPDPFDPMDQALHRLAGDHLPGGSGDRTLVHSYGLRRDLLAMTQVWRDTDDRS
DYVVAAKGAPEAIARMCGLDDATLGALSGAVDAMATEGLRVLGVARTSHPDQDWPATQLG
FRFEFLGLVGLADPLRAAVPAAVADCRAAGIRVVMITGDYPATAQAIARQAGIDAETCVT
GEEIAALDDAALAERLRRATVFARIMPEQKLRIVQALKADGEVVAMTGDGVNDAPSLKAA
HIGIAMGGRGTDVAREASAIVLLDDDFASIVKAVRLGRRIYDNLVKAMGFIFAVHVPIAG
LALLPLLFGLPILLGPIHIAFLEMIIDPVCSIVFEAETAEDDAMRRPPRDPEQPLFSRAL
IVWGMLQGLLVFLLVAGVFVIGQMRAMPDTELRALTFFALVLSFVGLIFVNRSFSASLLT
ALRRPNAMLAGMLGIVAVVLIASLAWPWLRDLFRFGPLHPDDLGLTAAAALLVLIVLELV
KPLWRKMMRQPG