Protein Info for TX73_014445 in Rhodopseudomonas palustris CGA009

Annotation: monovalent cation/H+ antiporter subunit A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 975 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 33 to 53 (21 residues), see Phobius details amino acids 80 to 100 (21 residues), see Phobius details amino acids 111 to 129 (19 residues), see Phobius details amino acids 135 to 153 (19 residues), see Phobius details amino acids 165 to 188 (24 residues), see Phobius details amino acids 208 to 232 (25 residues), see Phobius details amino acids 245 to 267 (23 residues), see Phobius details amino acids 273 to 294 (22 residues), see Phobius details amino acids 301 to 319 (19 residues), see Phobius details amino acids 325 to 349 (25 residues), see Phobius details amino acids 371 to 393 (23 residues), see Phobius details amino acids 413 to 432 (20 residues), see Phobius details amino acids 462 to 485 (24 residues), see Phobius details amino acids 505 to 526 (22 residues), see Phobius details amino acids 577 to 597 (21 residues), see Phobius details amino acids 609 to 628 (20 residues), see Phobius details amino acids 635 to 654 (20 residues), see Phobius details amino acids 660 to 681 (22 residues), see Phobius details amino acids 703 to 724 (22 residues), see Phobius details amino acids 762 to 780 (19 residues), see Phobius details amino acids 818 to 841 (24 residues), see Phobius details amino acids 851 to 871 (21 residues), see Phobius details amino acids 885 to 904 (20 residues), see Phobius details amino acids 927 to 951 (25 residues), see Phobius details PF00662: Proton_antipo_N" amino acids 68 to 113 (46 residues), 35.1 bits, see alignment 2.5e-12 PF00361: Proton_antipo_M" amino acids 129 to 403 (275 residues), 208.6 bits, see alignment E=3.1e-65 PF13244: MbhD" amino acids 619 to 683 (65 residues), 65.2 bits, see alignment 1.2e-21 PF20501: MbhE" amino acids 701 to 797 (97 residues), 154.1 bits, see alignment E=2.3e-49 PF04039: MnhB" amino acids 822 to 944 (123 residues), 116.3 bits, see alignment E=2.7e-37

Best Hits

Predicted SEED Role

"Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (975 amino acids)

>TX73_014445 monovalent cation/H+ antiporter subunit A (Rhodopseudomonas palustris CGA009)
MPQNVYLLAVILLPFAGSLLAALLPANARNAEAWLAALVALGCLALLVLLYPGAETVPIR
YQLEWLPQFGLNFTLRLDGFAWAFACLITAIGALVVLYARYYMSPSDPVPRFFSFLLGFM
GAMLGIVLSGNLIQLVFFWELTSLFSFLLIGYWHHNAAAREGARVALTITGTGGLCLFAG
VVVLGHIVGSYDLDAVLSAGTEVRGHALYVPTLILILLGALTKSAQFPFHFWLPRAMTAP
TPVSAYLHSATMVKAGVFLLVRLWPVLGGTNEWLWIVGTTGLATFIVGAYLAVFQRDLKG
LLAYSTISHLGLITLLIGLDRPLALVAAIFHIFNHATFKASLFMAAGIIDHETGTRDLRR
LSGLWKFMPKTGALAIVAASAMAGVPLLNGFLSKEMFFAETIETHDGSMLDDALPYIVTL
ASMFTVAYSLRFIREVFFGPPPVDLPRTPHEPPRWMRFPVELLVLTCLVVGIVPSLTIGP
FLQLAVHAVLGAATPYYSLAVWHGFNWPLLMSVIALVGGVLLYLMLREPLQQGLTSSLFA
GRFKTQRVFDLVLVTVSWRWARAIERVFGTRRLQPQLLLLVCVALIAATVPVLTRGLSLA
PVALGGIDPALAVVWSVGIACALGGTAVAKFHRLAALILIGGSGLTTCLTFVWFSAPDLA
LTQIGVEIVTTVLLLLGLRWLPKQLETGEITANRSVLKLVQRIRDLAVAAAAGIGVALLA
YAVMTRAAPDSIAQFFMRHAYADGGGTNVVNVILVDFRGFDTLGEITVLAVVALTVFALL
RRFRPAADSIDIPEQQRLQDEHDDADADRRKGDTIADYLAVPAMIMQLLFPFIFIAAMYL
LLRGHDQPGGGFVAGIAMAAALILQYMAGGARWIEARLRIHPLRWIAIGLLLALFTGAAA
LPLARPFLTSAFAYAEIPWIGKVPLASAALFDLGVFSLVVGATALMLLALAHQSIRGHRR
PSGGRAATPEVSRWN