Protein Info for TX73_014315 in Rhodopseudomonas palustris CGA009

Annotation: O-acetylhomoserine aminocarboxypropyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 426 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details TIGR01326: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase" amino acids 8 to 424 (417 residues), 623.8 bits, see alignment E=6e-192 PF01053: Cys_Met_Meta_PP" amino acids 9 to 424 (416 residues), 438.7 bits, see alignment E=3.4e-135 PF01212: Beta_elim_lyase" amino acids 62 to 209 (148 residues), 32.9 bits, see alignment E=1.1e-11 PF01041: DegT_DnrJ_EryC1" amino acids 62 to 186 (125 residues), 36.7 bits, see alignment E=7.5e-13 PF00155: Aminotran_1_2" amino acids 65 to 240 (176 residues), 30.7 bits, see alignment E=4.9e-11 PF00266: Aminotran_5" amino acids 86 to 215 (130 residues), 29 bits, see alignment E=1.4e-10

Best Hits

Swiss-Prot: 53% identical to METY_LEPME: O-acetyl-L-homoserine sulfhydrylase (metY) from Leptospira meyeri

KEGG orthology group: K01740, O-acetylhomoserine (thiol)-lyase [EC: 2.5.1.49] (inferred from 100% identity to rpt:Rpal_3102)

MetaCyc: 53% identical to O-acetylhomoserine sulfhydrylase (Leptospira meyeri)
O-acetylhomoserine aminocarboxypropyltransferase. [EC: 2.5.1.49]

Predicted SEED Role

"O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)" in subsystem Methionine Biosynthesis (EC 2.5.1.48, EC 2.5.1.49)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.48, 2.5.1.49

Use Curated BLAST to search for 2.5.1.48 or 2.5.1.49

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (426 amino acids)

>TX73_014315 O-acetylhomoserine aminocarboxypropyltransferase (Rhodopseudomonas palustris CGA009)
MTERNPGFATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRI
TNPTTSVLEERVAALEGGTAALATASGHAAQLVALQQLMQPGDEFIAARKLYGGSINQFT
HAFKSFGWNVVWADTDDLASFQRAVSPKTKAIFIESIANPGGSITDIEAVAEVARNAGVP
LIVDNTLATPYLIRPIDHGADIVVHSLTKFLGGHGNSLGGIIVDAGTFDWSKDGKYPMLS
EPRPEYHGLKIQETFGNFSFAIACRVLGLRDLGPALSPFNAFMLLTGIETLPLRMQKHCE
NAKAIAEFLSTHKAVDEVNYSGLASSKYAALARKYAPKGAGAVFTFSLKGGYQAGIDLVA
NLKLFSHLANVGDTRSLIIHPASTTHSQLDDAQKTAAGAAPNMVRVSIGIEDKDDLIADL
DQALGG