Protein Info for TX73_012305 in Rhodopseudomonas palustris CGA009

Annotation: ATP-binding cassette domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 17 to 164 (148 residues), 98.7 bits, E=4.6e-32

Best Hits

Swiss-Prot: 44% identical to YCLP_BACSU: Petrobactin import ATP-binding protein YclP (yclP) from Bacillus subtilis (strain 168)

KEGG orthology group: K02013, iron complex transport system ATP-binding protein [EC: 3.6.3.34] (inferred from 100% identity to rpa:RPA2382)

MetaCyc: 38% identical to iron(III) hydroxamate ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-11-RXN [EC: 7.2.2.16]; TRANS-RXN-297 [EC: 7.2.2.16]; TRANS-RXN-298 [EC: 7.2.2.16]

Predicted SEED Role

"Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1)" (TC 3.A.1.14.1)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.34

Use Curated BLAST to search for 3.6.3.34 or 7.2.2.16

Protein Sequence (252 amino acids)

>TX73_012305 ATP-binding cassette domain-containing protein (Rhodopseudomonas palustris CGA009)
MIVVNNVSLAHQGAPILKDINLEIPETGVTALIGPNGAGKSSLLSLIARLQPLQQGTITV
DGLAVGATPSRILARTLAILRQDPAIASRLRVRELVAFGRFPHNGGRITEEDRALTQAAL
ERFDLTSFADRFIDTLSGGQRQLVLVAMTFCQGTRWLLLDEPLNNLDMFYARELMRALRE
IADSERRAIVIVLHDINQAVTYADYIVALKHGAVVASGPPALIANTTSLQRIFGYEMPVE
SYHGKPVVLNHL