Protein Info for TX73_011055 in Rhodopseudomonas palustris CGA009

Annotation: carboxyl transferase domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01039: Carboxyl_trans
  • amino acids 48 to 530 (483 residues), 419.5 bits, E=8.8e-130

Best Hits

KEGG orthology group: K13778, geranyl-CoA carboxylase beta subunit [EC: 6.4.1.5] (inferred from 99% identity to rpt:Rpal_2435)

MetaCyc: 52% identical to cis-geranyl-CoA carboxylase beta-subunit (Pseudomonas aeruginosa PAO1)
Geranoyl-CoA carboxylase. [EC: 6.4.1.5]

Predicted SEED Role

"Geranyl-CoA carboxylase carboxyl transferase subunit"

MetaCyc Pathways

• cis-geranyl-CoA degradation (3/9 steps found)

KEGG Metabolic Maps

• Geraniol degradation

Isozymes

Compare fitness of predicted isozymes for: 6.4.1.5

Use Curated BLAST to search for 6.4.1.5

Protein Sequence (540 amino acids)

>TX73_011055 carboxyl transferase domain-containing protein (Rhodopseudomonas palustris CGA009)
MAIIESTVAPGSEGFRANRDSMLALIERMRMLEARARTLSAGSAERFHKRGQLLPRERVA
LVLDPGTPFLELSTLAGYMFDTANADKSVPGGGVIGGIGYVAGIRCMISANDSGIDAGAL
QPFGLDKTLRIQELALENKLPFVQLVESAGANLLRYRVEDFVRGGNIFRNLARMSAAGLP
VVTVTHGSSTAGGAYQTGLSDYIVMVRGRTRAFLAGPPLLKAATGEIATEEELGGAEMHT
SISGLGDYLAEDDRDALRIARDIMAGLPWDRSGPGPDPASYHPPLYDPEELLGIMPMDHK
RPVDMRQVIARIVDESDFTEMSPNYGPATVVGQARIAGMAIGIITNNGPLDPAGANKATH
FIQACCQSRTPILYLNNTTGYIVGRAYEEAGMIKHGSKMIQAVTSATVPQITIYCGASFG
AGNYGMCGRGFHPRFCFSWPNAKTAVMGGEQAAETMAIVSEAGAARKGVPVDREKLDQMK
AGITAVFNGQMDVFATSARMLDDGVIDPRDTRAVLAEVLAICRESEAREPQRMQFAVSRP