Protein Info for TX73_010830 in Rhodopseudomonas palustris CGA009

Annotation: amidohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 626 PF07969: Amidohydro_3" amino acids 52 to 536 (485 residues), 448.8 bits, see alignment E=4e-138 PF01979: Amidohydro_1" amino acids 416 to 535 (120 residues), 25.6 bits, see alignment E=7e-10

Best Hits

KEGG orthology group: K07047, (no description) (inferred from 100% identity to rpa:RPA2101)

Predicted SEED Role

"Exoenzymes regulatory protein AepA precursor"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (626 amino acids)

>TX73_010830 amidohydrolase (Rhodopseudomonas palustris CGA009)
MTDAPDLILHRGLFTTLDRSNPIASAVAISGGRFSAVGHDREVLPLAGPSTKVIDLKGRR
VLPGLIDNHLHIIRGGLNFNMELRWDGVRSLADAMNMLKRQVAITPPPQWVRVVGGFTEH
QFAEKRLPTIEELNAVAPDTPVFLLHLYDRAILNGAALRAVGYTRDTPEPPGGEITRDAN
GNPTGLLLAKPNANILYATLAKGPKLPFDYQVNSTRHFMRELNRLGVTGAIDAGGGFQNY
PDDYAVIQKLDEEGLLTIRLAYNLFTQKPKGEKDDFLNWTKTSKYKQGNDYFRHNGAGEM
LVFSAADFEDFRVPRPDMPPEMEGELEEVVRILVQNKWPWRLHATYDETISRALDVFEKV
NQDTPLDGLHWFFDHAETISDRSIDRIAALGGGIAVQHRMAYQGEYFVERYGFGAAEATP
PVRRILDSGVKVSAGTDATRVASYNPWVSLSWLVTGRTVGGLRITPQRNCLDRETALRMW
TENVTWFSNEEGNKGRVAVGQLADVVVPDRDYFSCSEAEIADTTSLLTMVGGKVVYGAGE
FAGLDDSAPPPAMPDWSPVRRFGGYAAWADDESAAGKVAGQAMSSCGCANRCTLHGHDHA
TAWSSKLPVSDLKSFWGALGCACWAV