Protein Info for TX73_008900 in Rhodopseudomonas palustris CGA009

Annotation: bifunctional alpha/beta hydrolase/OsmC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 407 PF02129: Peptidase_S15" amino acids 15 to 138 (124 residues), 27.1 bits, see alignment E=9.8e-10 PF12697: Abhydrolase_6" amino acids 32 to 232 (201 residues), 41.1 bits, see alignment E=9.9e-14 PF00561: Abhydrolase_1" amino acids 33 to 146 (114 residues), 30.9 bits, see alignment E=6.8e-11 PF12146: Hydrolase_4" amino acids 49 to 134 (86 residues), 46.3 bits, see alignment E=1e-15 PF00326: Peptidase_S9" amino acids 51 to 252 (202 residues), 23.7 bits, see alignment E=9.2e-09 PF02566: OsmC" amino acids 300 to 402 (103 residues), 60.2 bits, see alignment E=7.1e-20

Best Hits

KEGG orthology group: K06889, (no description) K07397, putative redox protein (inferred from 100% identity to rpa:RPA1730)

Predicted SEED Role

"Bll2902 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (407 amino acids)

>TX73_008900 bifunctional alpha/beta hydrolase/OsmC family protein (Rhodopseudomonas palustris CGA009)
MPTERFQFAGSGGHQLAAALDLPDAQPLAYALFAHCFTCSKDNLAARRISAAMAARGIAV
LRFDFTGLGASEGEFENATFSSNVADLVLAADHLRATHRAPTLLIGHSLGGAAVLAAAAQ
IPEAKAIATIAAPSDPSHVTGLFADDIETIRTEGRVNVSLAGRPFTIKREFLDDIAEHNL
MAEIGKLHKALLILHAPTDDTVGIDNATKIFLAAKHPKSFVSLDHADHLLSDRRDANYAA
GVIAAWAQRYIDAEPPAPTAGAPEVPRLVTVQETGDGKFQQQISVGPHRLVADEPASVGG
RDSGPGPYDLLLSALGACTSMTMRLYAERKALPLDRVTVTLSHAKIHAEDCAECETKVGL
LDRIERVIGIEGDLSAEQRAKLIEIADKCPVHRTLTSEVSIITRSTD