Protein Info for TX73_008635 in Rhodopseudomonas palustris CGA009

Annotation: EAL domain-containing response regulator

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 416 PF00072: Response_reg" amino acids 13 to 127 (115 residues), 50.7 bits, see alignment E=1.9e-17 PF00563: EAL" amino acids 151 to 384 (234 residues), 221.3 bits, see alignment E=1.2e-69

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpt:Rpal_1876)

Predicted SEED Role

"Probable two-component response regulator"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (416 amino acids)

>TX73_008635 EAL domain-containing response regulator (Rhodopseudomonas palustris CGA009)
MVDPTNHNPAIDVLVVDDDPVQGAIVSGVCTKLGYRPHFASSYHEAAARLATGRFDYITI
DLSLGDHDGIELLRLIAETGAKPRRIIVISGCEERILNATVRMAHAVGMLDTISLPKPID
LALLRGALAPFQEAAASRRGVDSRLSEITADDLRRGLDRGEVYAAFQPKIDLSTGKVTGC
EALARWDSATFGPVGPDVFIPLAEQGGLIKTMTLRMLRDSMTFAAAFLPTEPKFVVAVNL
SATLLSDTSLPEEVERLLAEIGVPARSLMIEVTETTAMADVGRAMDVLLRLRLKGIGISM
DDFGTGYSSLSALARMPFSELKIDRSFVKDCLTDADMWKIVSSSVAIAHQYNMKVVAEGI
EDAATWHALDALGCDIGQGFEFSRALRQDAFVEWYHGWMARPPATRAAVVPLQREA