Protein Info for TX73_006815 in Rhodopseudomonas palustris CGA009

Annotation: ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1387 PF13191: AAA_16" amino acids 5 to 177 (173 residues), 84.6 bits, see alignment E=3.7e-27 PF13185: GAF_2" amino acids 980 to 1123 (144 residues), 42.1 bits, see alignment E=3e-14 PF01590: GAF" amino acids 980 to 1122 (143 residues), 43.5 bits, see alignment E=1.4e-14 PF00512: HisKA" amino acids 1161 to 1226 (66 residues), 33 bits, see alignment 1.5e-11 PF02518: HATPase_c" amino acids 1273 to 1381 (109 residues), 100.4 bits, see alignment E=2.6e-32 PF14501: HATPase_c_5" amino acids 1274 to 1367 (94 residues), 23.4 bits, see alignment 1.4e-08

Best Hits

KEGG orthology group: K10819, histidine kinase (inferred from 100% identity to rpa:RPA1328)

Predicted SEED Role

"FIG01005993: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1387 amino acids)

>TX73_006815 ATP-binding protein (Rhodopseudomonas palustris CGA009)
MVRSLDNVRQSCRAEVVLVSGPPGAGKSALVGRLLKRVGQGDAISAVGKGDPLRKAIPYA
PIVQALRSAMISLVAGDREAREVIRSRLAEVPGCGRLLTELIPDVTLLSGSSRPLPEVPA
HLAQVRTMRIIRETFATLASAQTPLILFLDDLQWFDGASLDVAKALLDARSSHILLICSH
RSDERSDGPWRSLSDEARASGIPCTEMNLAALSPGDTRELIAFALDQPVEQVGELSAIIH
RETNGNPFYIGQLVQKLTDEQIVSFDGARQQWVWDQARLFQGFTVIEFMARRLEALPKRQ
REVLRHLACLSRRGSIEVLAGLTAMSSDEVRKLVDSLVQANLISRAGEYLTFSHDRVREA
AYSLTPEERRPREHLRIARYLLAAGIGDCSPDLSFDIATQITRADRSKLADRERVIFAGV
LLTAARTSRSTGAAEQALRFLDVARDLRSPSGVPDRAFPVFAIEWLRCDCLLALADTEDA
LIALGGLLSVAVTPVEIADTYRLRALALTVRSEYDPAIEAALQGLAALGIQIERHPDMSD
LERLYRTCQERLEQLTPAGILALPDTSDAIARAAQPLLSTLISASFVPGDLRFLHVLKIV
ELTLDYGLTPESAYGLAWFGVYGAHHFAAYEQGVLWAEVACRMVEREGYEVQRAAALIAL
DQVSVWTRPMRFALERAREGARVGQAAGDLGMACYARNHIASNLLVLGEPLDAVRGEISE
GLSYTIEIGYKDIERILDAQMGLVTALLSGDSDRHQVRDADAVTSKATQFWVAYYAGVTA
FLFNRDVAALRHLEKAMDLAWSAPAHIDTAQCRFFFALASCRSIAGGRPDDDKIARLDAV
RARFAEWARLNPDTFESKSLLLDAEAARLSGDGAAAQRLYERAARAAERTGFIHDQALAH
ELAGNYYVEAGLFAPAQGCLIAAGACNRQWGAIGKATHLAVRFPQHAGRVAPAEDGAGQR
ELDLAALTAAAQTLAEEVGLEQVLRTLMRSMIVHAGAQFGLFLLVQDGVAGIEASARVER
QEIRVDLYGAIPTDDDLPLALLNTVMRIKKAVTFADVSTDPPQLDAAGPRRRAARSLACI
PFIKRGDLVGVLYLENSLAANVFTPGRTAMLEVLAAQAAISLDAARLYRNLIDENRRRAE
AEFQLREARAELGRTSQMTALGSFAASIVHEINQPIASILAQTEAALRWLNREQPDIGEV
TQGLTRIRNSGRRTADIVKSLRSLGKQAPATFSPICLEEVVEEVMRLIAEDLDAGSVQIT
VGLSDQRRRISADRVQLQQVIFNLVTNAIQAMAEMEESARRIAIRTTDAGDGMVRLTIED
SGCGMSEEVRGKIFEPFFTTKTAGMGVGLAICRSIVELHRGTIDVRSTPGQGSTFEIAIP
VCEHVAT