Protein Info for TX73_006810 in Rhodopseudomonas palustris CGA009

Annotation: protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 318 PF07714: PK_Tyr_Ser-Thr" amino acids 118 to 271 (154 residues), 44.7 bits, see alignment E=1.1e-15 PF00069: Pkinase" amino acids 123 to 277 (155 residues), 48.1 bits, see alignment E=1.1e-16

Best Hits

KEGG orthology group: K00924, [EC: 2.7.1.-] (inferred from 100% identity to rpa:RPA1327)

Predicted SEED Role

"FIG01005993: hypothetical protein"

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.1.-

Use Curated BLAST to search for 2.7.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (318 amino acids)

>TX73_006810 protein kinase (Rhodopseudomonas palustris CGA009)
MATSQQTCHGEARCSSEEPRPYQAINRQWWSELALSFTGLADGIETHLAEEKSGRTWRIR
SAAAGTFAAARLEREATLAARVGAAAAELPAYVGNSDKVVLVYPAARRALASLPIGEVAV
DRFLAIAEAAAIALSRVHACDVVHGTLDAGKVLLDENGLVRFAEFGRARLTGQELAPDMS
GLPQIDFKYAAPEQARRDHPVLDTRSDLYALGVILYEFLVGRPPLLAASIADWLHAHVAI
DVLPPSHIRGGIPPAIDAVLLKLLAKDPGQRYQTASELQAEIARIAVLAWSGGRGGHTSL
SVRKAGRPGPSRRRVVWP