Protein Info for TX73_005650 in Rhodopseudomonas palustris CGA009

Annotation: crossover junction endodeoxyribonuclease RuvC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR00228: crossover junction endodeoxyribonuclease RuvC
  • amino acids 12 to 162 (151 residues), 146 bits, E=4.4e-47
• PF02075: RuvC
  • amino acids 12 to 159 (148 residues), 155.8 bits, E=3.7e-50

Best Hits

Swiss-Prot: 100% identical to RUVC_RHOPT: Crossover junction endodeoxyribonuclease RuvC (ruvC) from Rhodopseudomonas palustris (strain TIE-1)

KEGG orthology group: K01159, crossover junction endodeoxyribonuclease RuvC [EC: 3.1.22.4] (inferred from 100% identity to rpt:Rpal_1289)

MetaCyc: 48% identical to crossover junction endodeoxyribonuclease RuvC (Escherichia coli K-12 substr. MG1655)
3.1.22.4-RXN [EC: 3.1.21.10]

Predicted SEED Role

"Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)" in subsystem DNA-replication or RuvABC plus a hypothetical (EC 3.1.22.4)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.21.10 or 3.1.22.4

Protein Sequence (174 amino acids)

>TX73_005650 crossover junction endodeoxyribonuclease RuvC (Rhodopseudomonas palustris CGA009)
MTAVSIRRPIRILGIDPGLRRTGWGVVDSDGNRLVYVACGSVEPRDTLPLAERLLAIHDG
LAKVLAAHAPAEAAVEQTFVNKDGAATLKLGQARGVAMLVPAMHGLLVAEYAPNLVKKTV
VGAGHADKTQIQMMLKILLPKADPKTADAADALAIAITHAHHRGAAQRLKAVGA