Protein Info for TX73_003505 in Rhodopseudomonas palustris CGA009

Annotation: benzoyl-CoA 2,3-epoxidase subunit BoxB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 TIGR03225: benzoyl-CoA oxygenase, B subunit" amino acids 8 to 481 (474 residues), 911.2 bits, see alignment E=7e-279

Best Hits

Swiss-Prot: 60% identical to BOXB_AZOEV: Benzoyl-CoA oxygenase component B (boxB) from Azoarcus evansii

KEGG orthology group: None (inferred from 100% identity to rpa:RPA0677)

MetaCyc: 60% identical to benzoyl-CoA oxygenase component B (Aromatoleum evansii)
RXN-2401 [EC: 1.14.13.208]

Predicted SEED Role

"Benzoyl-CoA oxygenase component B" in subsystem Benzoate transport and degradation cluster

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.13.208

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (483 amino acids)

>TX73_003505 benzoyl-CoA 2,3-epoxidase subunit BoxB (Rhodopseudomonas palustris CGA009)
MNMNIMHVDYSTKIPNNVDLGSDRQVLKALEGWHPGYIDWWNDMGPEGFQESLVYLRTAY
SVDPRGWAKFDYVKMPDYRWGILLAPKEEGRVVPFGQHYGEPAWQEVPGEHRAMLRRLIV
IQGDTEPASVEQQRHLGKTAPSLYDMRNLFQVNVEEGRHLWAMVYLLQKYFGRDGREEAD
GLLRRRSGSDDAPRMLGAFNEATPDWLSFFMFTYFTDRDGKMQLHSLAQSGFDPLSRTCR
FMLTEEAHHMFVGETGISRVVQRTCDAMRVAGISDPTDVDKVRALGVIDLPTVQKKLNLH
YSLSLDLFGSEVSTNAANAFNAGIKGRFHETQIQDDHKLERDTYPVLKLVDGEIKRVDEP
ALTALNMRLRDDYSQDCVKGLLRWNKVITTAGYDFQLKLPHVAFHRQIGEFKDVEATPDG
VLIDPATWAKRRHEWLPSTDDGEFIASLMVPVSEPGQYAPWISPPKVGIDNRPGDFEYVK
IET