Protein Info for TX73_003410 in Rhodopseudomonas palustris CGA009

Annotation: benzoyl-CoA reductase subunit B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR02260: benzoyl-CoA reductase, subunit B
  • amino acids 13 to 425 (413 residues), 948.3 bits, E=1.8e-290
• PF06050: HGD-D
  • amino acids 54 to 425 (372 residues), 202.9 bits, E=5.6e-64

Best Hits

Swiss-Prot: 76% identical to BCRB_THAAR: Benzoyl-CoA reductase subunit B (bcrB) from Thauera aromatica

KEGG orthology group: None (inferred from 99% identity to rpx:Rpdx1_4128)

MetaCyc: 100% identical to BadE (Rhodopseudomonas palustris)
1.3.99.15-RXN [EC: 1.3.7.8]

Predicted SEED Role

"Benzoyl-CoA reductase subunit BadE (EC 1.3.99.15)" (EC 1.3.99.15)

MetaCyc Pathways

• benzoyl-CoA degradation III (anaerobic) (7/9 steps found)
• benzoyl-CoA degradation II (anaerobic) (2/7 steps found)
• benzoate fermentation (to acetate and cyclohexane carboxylate) (7/17 steps found)
• toluene degradation VI (anaerobic) (5/18 steps found)
• anaerobic aromatic compound degradation (Thauera aromatica) (8/27 steps found)

KEGG Metabolic Maps

• Benzoate degradation via CoA ligation

Isozymes

Compare fitness of predicted isozymes for: 1.3.7.8, 1.3.99.15

Use Curated BLAST to search for 1.3.7.8 or 1.3.99.15

Protein Sequence (436 amino acids)

>TX73_003410 benzoyl-CoA reductase subunit B (Rhodopseudomonas palustris CGA009)
MTVIVGPKTKPPEAIKDASMARQKQMVNAHYDRLASAKERGEKVAATFVPGNLNELLMCF
DMVNNLPEVNAIQNGLRRQSGGYVMEAEKLGHSEDVCTYVKSDIGMMAKGNIGPNGKPLP
DPDVLLLSYTGCFTFMKWFELLRRQYKCETIMFQTPYLADGRITKDMISYMVKQLRQDVI
PKLERISGVKFDIDRLREYLRKSAKAEDDHVWVLQSAKHKPSPIDAYFGGIYYIGPIFGA
FRGTDDAIEYYKFLRAEVEQRIAQGKGPVTPDGDMGQERYRLVVEGPPNYTNFRQFWKMF
YDEGAVVVASSYTKVGGTYDYGFRHDPDRPLESLAEYCLNVYTNRNLPMRVDMLENYINE
YEADGLLINSIKSCNSFSAGQLLMMREVEKRTGKPAAFIETDLVDPRYFSAANVKNRLES
YFQMIEQKRAGFRGAA