Protein Info for TX73_001785 in Rhodopseudomonas palustris CGA009

Annotation: peptidase S10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 521 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF00450: Peptidase_S10" amino acids 119 to 251 (133 residues), 55.3 bits, see alignment E=3.7e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA0344)

Predicted SEED Role

"peptidase S10, serine carboxypeptidase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (521 amino acids)

>TX73_001785 peptidase S10 (Rhodopseudomonas palustris CGA009)
MPLSPRSAVTASMLIAALALPQLGSSAVSQEARPAAPHAERAKPNAEQADAVASKAEASP
ARAELNSLPPDVTTKHSLALPGRTLAFTATAGSIRLFNGKGEPQADVAITTYKLDGADAR
TRPVTFLFNGGPGASSAWLQLGAAGPWRLPIGNSVVASSPPVLQANAETWLDFTDLVFID
PVGTGYSRFVASGDEVRKHFYAVEGDISAMAVVIRRWLEKNDRLVSPKYLAGESYGGIRG
PKVVDNLQTKQGVGVNGLILVSPVLDFRDLSGSSLLQYAARLPSMTAVARQQKGKVNRAD
LADVESYARSEFLTDLVKGEADKEATTRLADRVSALTGIDKTVSRRLAGRFDTREFQREF
DRDRGRVTGRFDGAKLGLDPFPDSSAAHFGDPSADSLIAPLTSAAVQLTRSTLNWKPDGS
YELLNGSVAEQWDFGRGRQPLESTTQLREILSVDPSLQVLVTGGLFDLAAPYFGTQMVLD
QLPPTLAEKRVKFVVYPGGHMFYAEDAARQSLHDEVKAMMK