Protein Info for TX73_001595 in Rhodopseudomonas palustris CGA009

Annotation: DUF2585 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 transmembrane" amino acids 20 to 40 (21 residues), see Phobius details amino acids 69 to 89 (21 residues), see Phobius details amino acids 152 to 175 (24 residues), see Phobius details PF10755: DUF2585" amino acids 36 to 199 (164 residues), 285 bits, see alignment E=8.2e-90

Best Hits

Swiss-Prot: 100% identical to Y307_RHOPA: UPF0314 protein RPA0307 (RPA0307) from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)

KEGG orthology group: None (inferred from 100% identity to rpa:RPA0307)

Predicted SEED Role

"FIG01005639: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (203 amino acids)

>TX73_001595 DUF2585 domain-containing protein (Rhodopseudomonas palustris CGA009)
MSMAGAERPVSSAAGLPVRWALAVVLGLLAIQATVLFAMGRVPICTCGTVKLWHGVVMSS
ENSQHLTDWYTFSHIIHGFLFYAGTWLLLRRWPWTARLIVAVLIEGAWELTENSSFIIER
YRAGTISLDYYGDSIVNSVADTLAMISGFLLARWLPVTATVAIAVLFEVLVGLHIRDNLT
LNVIMLIHPFDAIRQWQAGPPII