Protein Info for TX73_000175 in Rhodopseudomonas palustris CGA009

Annotation: NAD(P)/FAD-dependent oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 485 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF12831: FAD_oxidored" amino acids 38 to 77 (40 residues), 29.8 bits, see alignment 8.5e-11 PF00890: FAD_binding_2" amino acids 39 to 81 (43 residues), 29 bits, see alignment 1.3e-10 PF13450: NAD_binding_8" amino acids 41 to 102 (62 residues), 46.8 bits, see alignment E=5.8e-16 PF01593: Amino_oxidase" amino acids 47 to 440 (394 residues), 151.1 bits, see alignment E=1.3e-47

Best Hits

KEGG orthology group: None (inferred from 100% identity to rpa:RPA0034)

Predicted SEED Role

"FIG01007087: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (485 amino acids)

>TX73_000175 NAD(P)/FAD-dependent oxidoreductase (Rhodopseudomonas palustris CGA009)
MTISRRSLLEGLLGAAAGLALLPVLGGRAGAALPREAEVVVVGAGAAGIAAARRIVAAGR
KVIVVEAASEIGGRCVTDTTSFAAPFDRGARWLHNPDSNPLVRLARSSGFAVTPVAPGQK
VRIGRRNARSRETEDFLAAFVRASRAISDASRGKSDISCAAALPNDLGDWAATIEYVLGP
ATTSKDLRALSAMDAVRTLDRTALLGCPQGVGSLLTQLASSLPIALSTPVKRIVWSGRDL
AVETTAGRIGARAIIVTASTNVLTSGNLGFSPELPKRQLDAAARLSLGSIDRIALQFKGN
PLGLSRDETIIERADDIRTATLVGNIGGTSLCTVDVAGSFGRQLAAQGEAAMQDFAIEWL
GKLFGSDIAGAVERKAVTRWNEMPYVLGAMSAAEPGGQPSRKVLGEPLGNLFFAGEATHE
TLFGTVQGAWESGERAADAALKKIGAVKEPAPEKPVRKQKPRREPQRQREQRPPATASGT
PSWWR