Protein Info for Synpcc7942_2327 in Synechococcus elongatus PCC 7942

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 157 transmembrane" amino acids 35 to 56 (22 residues), see Phobius details amino acids 67 to 88 (22 residues), see Phobius details amino acids 100 to 118 (19 residues), see Phobius details amino acids 130 to 147 (18 residues), see Phobius details PF06146: PsiE" amino acids 32 to 150 (119 residues), 117 bits, see alignment E=3.1e-38

Best Hits

KEGG orthology group: None (inferred from 100% identity to syf:Synpcc7942_2327)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q31KR2 at UniProt or InterPro

Protein Sequence (157 amino acids)

>Synpcc7942_2327 hypothetical protein (Synechococcus elongatus PCC 7942)
MAPRYRRLARLGQLWSDSDSFLTLVSSLEKFIAKVLSLAMIVVIIVSTIDLGIFLVKNLF
VFDPFFLKSALFEVFGMFLSVLIALEILENITAYLRRNVIQVELVVATSLIAIARKLIIL
DVNKISTGELFGLGFAVLALAISYWIVRSAPARNSHH