Protein Info for Synpcc7942_1574 in Synechococcus elongatus PCC 7942

Annotation: probable glucosidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 890 PF03200: Glyco_hydro_63" amino acids 693 to 785 (93 residues), 31.1 bits, see alignment E=6e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to syf:Synpcc7942_1574)

Predicted SEED Role

"Gll1168 protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q31MW5 at UniProt or InterPro

Protein Sequence (890 amino acids)

>Synpcc7942_1574 probable glucosidase (Synechococcus elongatus PCC 7942)
MNPEQQRIQQSVEPNSPWRQWGPYLSERQWGTVREDYSAGGDAWDYFPHDHARSRAYRWG
EDGLGGFCDRQANICFALAFWNGNDPILKERLFGLTNSEGNHGEDVKEYYFYVDNTPTHS
YMRWRYKYPQAAYPYETLVTVNGQRSKFEPEYELLDTGIFDSGYFDIEAEYAKATPSDLG
IRLQITNRGLQTAPIAVLPTLWLRNTWTWTGEVPAGRLTQVDDQAIKLSHRDYGDRWLYC
DRVNGAELELLFTDNETNFARLFGSTNPSPYVKDAFHQYLIEGDREAVNPVQTGTKAAAC
YRLEIPAGQTVTLQLRFCDRPQTAAFDTDFADSFSQRQQEADDFYQTLFPKLGDGDRLIQ
RQALAALLWSKQVYLYEVQTWLQGDAGQPPPPSPRSKGRNTNWRMFSANEVILMPDKWEY
PWFAAWDWAFHCVVMALIDPEFAKQQLRLLLSDNYVSPKGQIPAYEWAFGDVNPPVQAWA
AWKIYQSEKVRTGEGDREFLQQIFQRLLPNYYWWLNREDRDDKSLFQGGFLGLDNITIFN
RSAPLPTGGYLEQSDGTAWMGLFSLNMLAIALELNQQGTIYDHAISSFVRQFLNIAQAMN
QMGDDNLALWDETHGFYFSALRLPDDSEEQLQVYSLVGLAPMLAVLTLEPKFVHDLSDIQ
EVMDWAAKHHPELINNVVCTTTECSEQRHLLAIASPDQLRRLLQRLLNEDEFLSPYGIRS
ISKAHAQDPFVLHYQGNSFGVDYEPGESTSATFGGNSNWRGPIWFPMNYLLIEALQRYYH
YLGDEFQVECPTGSGQLMTLKQVAQELSQRLVNIFRTQPDGSRPTYGDIERFQIDPHWRD
LLLFHEYFHGDTGKGLGASQQTGWTALVAQLIQELNDETFYDSLGLMPSF