Protein Info for SMc04463 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 118 PF07883: Cupin_2" amino acids 32 to 97 (66 residues), 54.8 bits, see alignment E=1.3e-18 PF00190: Cupin_1" amino acids 36 to 90 (55 residues), 26.7 bits, see alignment E=7.6e-10 PF06052: 3-HAO" amino acids 40 to 101 (62 residues), 27.6 bits, see alignment E=4.2e-10 PF05899: Cupin_3" amino acids 45 to 93 (49 residues), 26 bits, see alignment E=1.2e-09

Best Hits

KEGG orthology group: None (inferred from 99% identity to smk:Sinme_3409)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92T91 at UniProt or InterPro

Protein Sequence (118 amino acids)

>SMc04463 hypothetical protein (Sinorhizobium meliloti 1021)
MRSINISEKLALFSSHWDPHVVSDYNDNDVMVVKFKGEYPFHKHETTDDFFYVLEGEMIM
DIEGKPSQVVKAGELFVVPKGVVHRPRAETEVKVLLIEPKGEPNSGDSDREPAPKPRI