Protein Info for SMc02341 in Sinorhizobium meliloti 1021
Annotation: sugar kinase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K00854, xylulokinase [EC: 2.7.1.17] (inferred from 100% identity to smk:Sinme_2620)Predicted SEED Role
"Putative xylulose kinase (EC 2.7.1.17)" in subsystem Xylose utilization (EC 2.7.1.17)
MetaCyc Pathways
- superpathway of glucose and xylose degradation (15/17 steps found)
- D-xylose degradation I (2/2 steps found)
- xylitol degradation I (2/2 steps found)
- D-arabinitol degradation I (1/2 steps found)
- superpathway of pentose and pentitol degradation (21/42 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 2.7.1.17
Use Curated BLAST to search for 2.7.1.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q92MP4 at UniProt or InterPro
Protein Sequence (477 amino acids)
>SMc02341 sugar kinase (Sinorhizobium meliloti 1021) MYLGIDLGTGSVKALLIDGDGKAVAEAARAYPVSSPMPGYAETSPADWWAQTVAAVRACC DGHGGDVRGIGLSGQAHGLVAVGADAKPLRPAILWADQRATAEMEAVLALPEAVRRPLAN PVVSGMAGLSLLWLRRNEPATYAAIRRILAPKDWLRLVMTGEAATEPSDASMTLLYDVGA GRWATDVLSSLSIDPAILAPIVESHSIAGRLSAAAAAELGLAAGTPVAAGLSDTASCLFG MGQTKPGSTILQVGSGIQIMSVVESIEPRVQPFYNSYRGIGGNLYSMAALQNGGTVFEWA RTVLGASWAEMYRSGFEENEGNGGVIFLPYVTGERAPLLDPNASAAWANMRLGCTRGQLI RSVFEGVALAVRDSWDALRGVGVSADRILLTGGGSTDPRWQQMLADILEVPLVPAHDLGN ATIGAAYLGGMAAGHWRCIEAIPFPDDLGRPIEPRPFQGLDALLPRFRATYRGLKHA