Protein Info for SMc02024 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 TIGR01891: amidohydrolase" amino acids 22 to 432 (411 residues), 258 bits, see alignment E=7.7e-81 PF01546: Peptidase_M20" amino acids 102 to 410 (309 residues), 30.4 bits, see alignment E=1.8e-11

Best Hits

KEGG orthology group: K12941, aminobenzoyl-glutamate utilization protein B (inferred from 100% identity to smk:Sinme_2585)

Predicted SEED Role

"Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit B" in subsystem p-Aminobenzoyl-Glutamate Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92MS5 at UniProt or InterPro

Protein Sequence (486 amino acids)

>SMc02024 hypothetical protein (Sinorhizobium meliloti 1021)
MNREDVMSIAAAIESMKPEFTRLSDSIWDFAELKFEEQRSSGLLAKALEDNDFSVRRGVA
GMDTAFIGESGSGKPVIAFLGEFDALASMSQAAGIAEAKPLVEGASGHGCGHNLLGVGSL
MAAIALARHLKANNLPGTVRYYGCPGEEGGSGKTFMVRAGLFDDVDTALTWHPAPFNGVR
STNNLAVLEYFYRFKGVAAHAANAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
DAGGRAANVVQANAEVLYLIRAPEMPQALDLATRVEKVARGAAMMTETEVEIVFDTASTN
LLPNITLETAMHENMVALGPIAFDEADIAFARSIQETFSQEAIKSSIRLYQMKRDVFSNA
NVDGSSPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQCWAPAWAIGTNPHTWQVVAQG
KSPIAHKAMAHAAKTLATTGLSLMTSPDLLAAARAEWLEKTDGKSYVCPIPADVTPGSHP
HGRPVR