Protein Info for SMc01944 in Sinorhizobium meliloti 1021

Annotation: haloperoxidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 333 signal peptide" amino acids 1 to 43 (43 residues), see Phobius details PF00561: Abhydrolase_1" amino acids 80 to 316 (237 residues), 117.9 bits, see alignment E=1.8e-37 PF12146: Hydrolase_4" amino acids 81 to 187 (107 residues), 56.8 bits, see alignment E=6.5e-19 amino acids 264 to 315 (52 residues), 31.1 bits, see alignment 4.6e-11 PF12697: Abhydrolase_6" amino acids 82 to 322 (241 residues), 71.8 bits, see alignment E=4.2e-23 PF00326: Peptidase_S9" amino acids 251 to 331 (81 residues), 28.2 bits, see alignment E=3.9e-10

Best Hits

Swiss-Prot: 75% identical to PRXC_PSEFL: Non-heme chloroperoxidase (cpo) from Pseudomonas fluorescens

KEGG orthology group: None (inferred from 100% identity to smk:Sinme_2527)

Predicted SEED Role

"Non-heme chloroperoxidase (EC 1.11.1.10)" (EC 1.11.1.10)

Isozymes

Compare fitness of predicted isozymes for: 1.11.1.10

Use Curated BLAST to search for 1.11.1.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92MX7 at UniProt or InterPro

Protein Sequence (333 amino acids)

>SMc01944 haloperoxidase (Sinorhizobium meliloti 1021)
MTKSQVKTTTNDVSRREILAGAIGAATATAAAALSAASPAVAGGAEPPAGAATPGATGSR
IITRDGVEIYYKDWGPKGGPVVILSHGWPLSSDSWEAQAFYLANNGFRVVTHDRRGHGRS
SQPWDGNDMDHYADDLADLIETLDLKDIFLAGFSTGGGEVARYIGRHGTARVAKAGLISA
VPPLMVKTDDNPGGLPKEVFDGLQAASLADRSQLYRDIASGPFFGFNRPGAKPSQGMIDS
FWLQGMTAGHKNAYDSIVAFSQTDFTEDLKKFDVPTLIIHGDDDQVVPIDAAARASKKLV
PQAELKVYPGAPHGITDTHKDQLNKDLLDFARS