Protein Info for SMc01907 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 729 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF13449: Phytase-like" amino acids 446 to 709 (264 residues), 183.7 bits, see alignment E=3.8e-58

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMc01907)

Predicted SEED Role

"Alkaline phosphatase (EC 3.1.3.1)" in subsystem Phosphate metabolism (EC 3.1.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92KF3 at UniProt or InterPro

Protein Sequence (729 amino acids)

>SMc01907 hypothetical protein (Sinorhizobium meliloti 1021)
MKAFSITTALAAALAASTASVVQAEQVFNRIASFAVATNLPEGAERNAPTSAEIITASED
GNTLIYSDSPGKRIGFIDITDAKAPEAGGIVSFSGEPTSVAVAGAKALVAVNTSESFTKP
SGVLAVVDIAGRKVDATCDLGGQPDSVAVNKDRTLAAIAIENERDEDVNDGQIPQMPAGD
LVILSLKDGAADCATIKHVTLTGLAEVAGDDPEPEFVAFNGRDEIALTLQENNHIVVIDG
KSATVKTHFPAGTVDLEAIDTKRDGSIAFTGEQAGRKREPDAIKWLDDRLVVANEGDYEG
GSRGFTIFDTTGKVLYESGAGFERAIASIGHYPEKRSSAKGVEPEGLELAQFGEDKLFFV
LSERASIVGVYKDTGGEPELVQLLPSGVSPEGAVAIPGRNLFATANEVDLVEDGGARSHV
MIYERAEGEAAYPQIRSVEKDGLPIGFGALSGLAAADKPGFLHAVNDSVFSSQPTIFTID
ATQKPALITEALPIIRDGAPAQKLDIEGIANDGEGGFWLASEGNSDKLYSHALLHVNKKG
EIKQEIALPEELRANEIRYGFEGVAVVGEGDDQVLWMAVQREWKDDEKGFVKLVSYKPSS
KEWGAVRYPLEKSEEGWVGLSEISVHGDYAYIVERDNLIGEAAKLKKLYRVALADLKPAA
LGGELPVVNKEEVRDLIPDLQSLNGYVVDKVEGFAVDAAGNGYVVTDNDGVDDSSGETLF
FSIGAMDAM