Protein Info for SMc01873 in Sinorhizobium meliloti 1021

Annotation: cell division protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 442 TIGR01174: cell division protein FtsA" amino acids 25 to 405 (381 residues), 345.8 bits, see alignment E=1.6e-107 PF14450: FtsA" amino acids 27 to 220 (194 residues), 33 bits, see alignment E=1e-11 amino acids 232 to 402 (171 residues), 119.3 bits, see alignment E=2.1e-38 PF02491: SHS2_FTSA" amino acids 112 to 187 (76 residues), 70.4 bits, see alignment E=2e-23 PF06723: MreB_Mbl" amino acids 212 to 379 (168 residues), 29.3 bits, see alignment E=5.9e-11

Best Hits

Swiss-Prot: 100% identical to FTSA_RHIME: Cell division protein FtsA (ftsA) from Rhizobium meliloti (strain 1021)

KEGG orthology group: K03590, cell division protein FtsA (inferred from 100% identity to sme:SMc01873)

Predicted SEED Role

"Cell division protein FtsA" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See O30994 at UniProt or InterPro

Protein Sequence (442 amino acids)

>SMc01873 cell division protein (Sinorhizobium meliloti 1021)
MSLFGSANFGLPRLKPLPSKRSHVVSVLDIGSTKVVCMIGRLTPRAESQILPGRTHSIEV
IGIGHQKSRGVKNGVIADLDAVESVVRLAVDAAERMAGLTIDSLIVNVSAGRLQSDVYTA
TIDLGGQEVEANDLKKVLAAAGHQSLRTDRAILHSLPTGFSLDGERGIRDPLAMFGDVLG
VDMHVLTAERPALKNLELCVNRAHLSVEGMVATPYASGLAALVDDEVELGCAAIDMGGGT
TTISVFAEGKLVHADAVGLGGHHVTTDLARGLSTRIEDAERLKVVHGSALPNSADERDII
SVPPIGEDDRDQPTHVPRALVSRIVRARIEETLELIRDRIQRSGFSPIVGKRIVLTGGAS
QLTGLPEAARRILARNVRIGRPLGVSGLPAAAKGPAFSTAVGLMIYPQVADLETHAAGSG
MFSTLGGNSRFARMGQWLKESF