Protein Info for SMc01865 in Sinorhizobium meliloti 1021

Annotation: cell division protein FtsW

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 384 transmembrane" amino acids 20 to 39 (20 residues), see Phobius details amino acids 59 to 77 (19 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 114 to 138 (25 residues), see Phobius details amino acids 149 to 169 (21 residues), see Phobius details amino acids 178 to 178 (1 residues), see Phobius details amino acids 182 to 186 (5 residues), see Phobius details amino acids 189 to 211 (23 residues), see Phobius details amino acids 273 to 293 (21 residues), see Phobius details amino acids 306 to 326 (21 residues), see Phobius details amino acids 339 to 360 (22 residues), see Phobius details TIGR02614: cell division protein FtsW" amino acids 18 to 363 (346 residues), 354.3 bits, see alignment E=3.6e-110 PF01098: FTSW_RODA_SPOVE" amino acids 21 to 364 (344 residues), 265.1 bits, see alignment E=4.9e-83

Best Hits

Swiss-Prot: 48% identical to FTSW_CAUVN: Probable peptidoglycan glycosyltransferase FtsW (ftsW) from Caulobacter vibrioides (strain NA1000 / CB15N)

KEGG orthology group: K03588, cell division protein FtsW (inferred from 100% identity to smk:Sinme_2157)

Predicted SEED Role

"Cell division protein FtsW" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92NL8 at UniProt or InterPro

Protein Sequence (384 amino acids)

>SMc01865 cell division protein FtsW (Sinorhizobium meliloti 1021)
MVSRAERGPVADWFWTIDRFFLAAFILLMGVGFMLSFAASPPVAERLGLDSFHFVKRHAL
FLLPSLVVMVGISFLSPRQVRRTAIILLVISTAMMVLALFFGQEVKGSRRWLSLAGISIQ
PSEFMKPAFVVVCAWLFAEHARQPEIPGNLLSILLFGIVGALLVAQPDLGQTILTTVVWG
GMFFMAGMPWLWIIVLASVAIGGFFAAYSILPHVAGRIDRFLTGEGDTFQVDTAREAIIR
GDWFGRGPGEGVVKRIIPDSHTDFIFSVAAEEFGIVFCMVVVVIFAFVVMRGLNHAFRER
NDFNRFAVAGLVLQIGIQSMINIGVNLELLPAKGMTLPLISYGGSSMVAICVTAGFILAL
TRHRPEKRAVERSLFRSGVGVPAE