Protein Info for SMc01648 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 665 PF02129: Peptidase_S15" amino acids 18 to 269 (252 residues), 254 bits, see alignment E=4e-79 TIGR00976: hydrolase CocE/NonD family protein" amino acids 18 to 507 (490 residues), 222.7 bits, see alignment E=5.8e-70 PF00561: Abhydrolase_1" amino acids 61 to 148 (88 residues), 36.1 bits, see alignment E=1.1e-12 PF00326: Peptidase_S9" amino acids 63 to 155 (93 residues), 26.9 bits, see alignment E=6.4e-10 PF08530: PepX_C" amino acids 298 to 518 (221 residues), 111 bits, see alignment E=1.7e-35

Best Hits

KEGG orthology group: K06978, (no description) (inferred from 100% identity to smk:Sinme_2240)

Predicted SEED Role

"glutaryl 7-ACA acylase precursor - Bacillus laterosporus"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92NE6 at UniProt or InterPro

Protein Sequence (665 amino acids)

>SMc01648 hypothetical protein (Sinorhizobium meliloti 1021)
MAERNFTVIENEWITLEDGTRLAARIWMPEGTEQKPVPAVLEYLPYRKRDGTCARDESTY
PAFAAAGIAGVRVDIRGSGESEGVIDGEYTPRELSDGCEIIEWIAAQPWSNGKVGMMGIS
WGGFNCLQVAALKPPALKAVISIASTVDRYNDDIHYKNGCHLSAQLSWAATMLAYQSRSP
DPELVGERWREMWLERLENEPFFLEEWLEHQRRDDFWRHGSISEDFDGFPIPALMIAGWA
DGYRNTPIKAVEGLGGKAKALIGPWVHKYPHFAWPKPRADFLGEAIRWWNRWLRDEKNDA
EQLPQMRAYILDGPRPAVRRNEDPGRWIAKDVWTTPEMRTFAVSSEGGLAAGSPSRRGIG
DVYLRSPLDTGTAAGEYFTLKPDAEMPGDQRIDDAGSLTFDTHPLLEAEDYLGQPVLDLE
LSCSAETANLAARIVDVHPDGTSTRVAFGVLNLAHRNGNAKPVPMEKNRKTRVTLVLDAC
GYRFRAGHRIRLSLSTSYWPIILPSPTDPGVTIDTASVSLSLPLLGDHREIVVPQPANPD
PLPHYIEHSPAETRRTVERDMTKCRTHYRIYENTGLVEHPGTGNATQDIRDETWTIAPDD
PHSMTGVSTWTCIARRGQQSLKTVSTSRLGCTETEWITSAKVEAFEDETKIFEKTFEKRI
RRDFM