Protein Info for SMc00763 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 PF01266: DAO" amino acids 6 to 107 (102 residues), 31.9 bits, see alignment E=5.3e-11 PF00890: FAD_binding_2" amino acids 6 to 53 (48 residues), 34 bits, see alignment 1e-11 PF12831: FAD_oxidored" amino acids 6 to 146 (141 residues), 37.2 bits, see alignment E=1.2e-12 PF03486: HI0933_like" amino acids 6 to 392 (387 residues), 493.1 bits, see alignment E=3e-151 TIGR00275: flavoprotein, HI0933 family" amino acids 7 to 392 (386 residues), 407.1 bits, see alignment E=3.8e-126 PF13450: NAD_binding_8" amino acids 9 to 40 (32 residues), 27.7 bits, see alignment (E = 1.4e-09)

Best Hits

KEGG orthology group: K07007, (no description) (inferred from 100% identity to sme:SMc00763)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92RY0 at UniProt or InterPro

Protein Sequence (394 amino acids)

>SMc00763 hypothetical protein (Sinorhizobium meliloti 1021)
MAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASP
RNFLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMK
EAGVQLRLETSIGEVERTASGFRVTTSAGTVDAASLVVASGGKSIPKMGATGLAYRIAEQ
FGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEARFGKAAFREAVLITHRGLSGPAI
LQISSYWREGEEIVLRLMPDIDIASILKGMRRANGRQAVQTALADILPRRLAQFFADEAK
LTGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGVDTRALDSRTMQAKEVP
GLYFVGECVDVTGWLGGYNFQWAWASGFVAGQDV