Protein Info for SMc00611 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 847 transmembrane" amino acids 29 to 49 (21 residues), see Phobius details amino acids 70 to 89 (20 residues), see Phobius details amino acids 101 to 123 (23 residues), see Phobius details amino acids 144 to 170 (27 residues), see Phobius details amino acids 182 to 202 (21 residues), see Phobius details amino acids 225 to 244 (20 residues), see Phobius details amino acids 250 to 268 (19 residues), see Phobius details amino acids 277 to 299 (23 residues), see Phobius details amino acids 305 to 323 (19 residues), see Phobius details amino acids 344 to 364 (21 residues), see Phobius details amino acids 382 to 403 (22 residues), see Phobius details amino acids 411 to 431 (21 residues), see Phobius details amino acids 436 to 453 (18 residues), see Phobius details amino acids 465 to 487 (23 residues), see Phobius details amino acids 509 to 529 (21 residues), see Phobius details PF09924: LPG_synthase_C" amino acids 554 to 840 (287 residues), 336.6 bits, see alignment E=6e-105

Best Hits

KEGG orthology group: K14205, phosphatidylglycerol lysyltransferase [EC: 2.3.2.3] (inferred from 100% identity to sme:SMc00611)

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.2.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92KG2 at UniProt or InterPro

Protein Sequence (847 amino acids)

>SMc00611 hypothetical protein (Sinorhizobium meliloti 1021)
MASSTEEFEAEDQQDRGAWRLFLRRNQRYLSAIGTLLVIALFGAAIFHLTAEVRYDDVVS
ALADTSRRSVATAILFTGLSFLALTFYDVSALDYIERKLPYPAVALTAACAYAVGNTAGF
GPLSGGAIRYRSYSRLGLKPEEIARLIAFVTLAFGLGLAVVTCLSLLAVGEYVAPLTGID
AAWLRAIAVFVLAGLLVVLIAARSGREVRIGRLVLRLPDSQTCSRQFLVTALDLAASATV
LYVLLPAGTVGWPAFLAIYAVAVGLGVLSHVPAGLGVFEAVIVASLGRAAGVDAVLGALV
LYRVIYHLLPLLIAIVVMIGIELRQLAGHPAASSLRRAGGRMTPLLLATLALVLALMLVL
SGVTPTPDENLAFLANYVPLPIIEGAHFLASLLGLALFIVARGLALRLDGAWWASVAIAL
AAILLSLVKAVALGEAGMLAFLLVGLLASRRLFNRPASLFGQALTLPWLTALGVICFGAF
VVLLFVYRDVAYSHELWWQFEFSAEAPRGLRAFLGVTIGASAVAIWSLMRPAAAAVAPAC
GQEMERAVAVVDAQDMSDANLVRMGDKSIMFSADGRAFIMYGRWARSWIALFDPVGPVDA
WPDLIWQFIEAARSNGCRAVFYQVSARGLSHYADAGLRAFRLGELAEVDLTRLEMKGGKW
ANLRQQVSRGIRDGLEFSVVAPPEIPAILPELGAVSDAWLAHHNAREKGFSLGAFDPRYL
TAQPVAILKRQGRIVAFANILITGTKEEGSVDLMRFSPDAPKGAMDFLFAQLMEYLKNEG
YRRFNLGMAPLSGMSERRLAPVWDRAGRAFYEHGERFYNFKGLRAFKSKFHPQWQPRYLV
ASTRSWR