Protein Info for SMc00108 in Sinorhizobium meliloti 1021

Annotation: acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 177 transmembrane" amino acids 75 to 94 (20 residues), see Phobius details PF13673: Acetyltransf_10" amino acids 60 to 159 (100 residues), 35 bits, see alignment E=2e-12 PF00583: Acetyltransf_1" amino acids 66 to 158 (93 residues), 61.6 bits, see alignment E=1.3e-20 PF13508: Acetyltransf_7" amino acids 77 to 159 (83 residues), 50.9 bits, see alignment E=2.5e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMc00108)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92RB6 at UniProt or InterPro

Protein Sequence (177 amino acids)

>SMc00108 acetyltransferase (Sinorhizobium meliloti 1021)
MAAENHQEPRMLQTVTPTLQPVPSARAPMVTIRCAKPRDLAELREMVAELAAHHGDAATI
TPEQLERDLFGRTPWITALVAEAGGALIGYAILVPQYRAAEGARGMEMHHLFVRPGHRGT
GIGRHLVAKAREQAKMAGCDYLSVSAATGNFQAHRFYESERFVPRPVTGMRYLQKLG