Protein Info for SMa2377 in Sinorhizobium meliloti 1021

Annotation: Permease, MFS

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 transmembrane" amino acids 9 to 32 (24 residues), see Phobius details amino acids 44 to 64 (21 residues), see Phobius details amino acids 76 to 94 (19 residues), see Phobius details amino acids 101 to 126 (26 residues), see Phobius details amino acids 138 to 157 (20 residues), see Phobius details amino acids 164 to 183 (20 residues), see Phobius details amino acids 216 to 239 (24 residues), see Phobius details amino acids 245 to 263 (19 residues), see Phobius details amino acids 275 to 294 (20 residues), see Phobius details amino acids 300 to 317 (18 residues), see Phobius details amino acids 338 to 358 (21 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details PF07690: MFS_1" amino acids 15 to 351 (337 residues), 116.3 bits, see alignment E=7.8e-38

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMa2377)

Predicted SEED Role

"FIG01075738: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92XG9 at UniProt or InterPro

Protein Sequence (389 amino acids)

>SMa2377 Permease, MFS (Sinorhizobium meliloti 1021)
MTVNVSPTVMFLLISFGTVLGIAGTDLVLPAIPAMPTALGGTAALAQMVLAAYAGGTLVG
LLTFGELGARYSRRKLLVWSLGLFAVTSLLSAYAPTLEWLVILRFAQGAFGSGPAVFAPG
FIHGLYPGDKAPSMFGRLGSIESLTPALAPIAGAYLMTVGGWQTSFLMLAGLAILCAVGS
WAYRQSLPDRLEALEVHQSYMSIIRNGDFLRHGLSQALSLGSILIFVFGAPAVMTGALGM
TIGDFILLQVFGIALFILASNASNALARRFGIERMIMIGTGSLVLGFLLILLYTSLGGRS
LTVLVPLWMTANGAFGIRGPIGFHQAIVASRGDHSRGAALVVAAILGITAGGTAAAAPFI
NVGWWPLALASSLAALLALLCLKLIGSTA