Protein Info for SMa1737 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 352 transmembrane" amino acids 24 to 43 (20 residues), see Phobius details amino acids 49 to 67 (19 residues), see Phobius details amino acids 79 to 98 (20 residues), see Phobius details amino acids 104 to 126 (23 residues), see Phobius details amino acids 137 to 158 (22 residues), see Phobius details amino acids 170 to 190 (21 residues), see Phobius details amino acids 202 to 222 (21 residues), see Phobius details amino acids 235 to 258 (24 residues), see Phobius details amino acids 269 to 290 (22 residues), see Phobius details amino acids 300 to 318 (19 residues), see Phobius details amino acids 330 to 350 (21 residues), see Phobius details PF03601: Cons_hypoth698" amino acids 29 to 323 (295 residues), 211.5 bits, see alignment E=6.8e-67

Best Hits

Swiss-Prot: 100% identical to Y4357_RHIME: UPF0324 membrane protein RA0957 (RA0957) from Rhizobium meliloti (strain 1021)

KEGG orthology group: None (inferred from 100% identity to sme:SMa1737)

Predicted SEED Role

"Inner membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92YC7 at UniProt or InterPro

Protein Sequence (352 amino acids)

>SMa1737 hypothetical protein (Sinorhizobium meliloti 1021)
MSDRTEQVATSDIPRPTQNLRTRVVSYFPGLAVAVLIAISAQFLSEHYGAPATLMALLLG
MSLNFLSESGARTVPGIHFASRAVLRFGVALLGARVSLEVLSDLGVSLLCLVTTALACTI
LFAIIVGKFAGMDWRLSLLTGGAVAICGASAAVALNAVLPPRQNSDRDLALTIVAITLLS
TSAMVLYPVLASHLQFDAKESGVFIGGTIHDVAQVVGAGFAMSEETGQIATLVKIVRVSL
LAPTIIAVLIMVTVLGAGAGQKPQKLGQVIPGFVLGFAFLAALKSMGFLPAAAGDVANDL
SRWLLLIALGAVGLKTSVKEFASIRPSHVTLALLATAFLAAFIVVGLLWYRG